Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SNORA51.8-201ENST00000384234 132 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 MIR589-201ENST00000385238 99 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 SNORA11.2-201ENST00000408318 127 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 U3.36-201ENST00000408418 213 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 HMGB3P31-201ENST00000413333 595 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 SFR1P2-201ENST00000421841 730 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC073310.1-201ENST00000423226 1033 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC108075.1-201ENST00000424692 529 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL138785.1-201ENST00000425821 331 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL606517.1-201ENST00000446914 387 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 GAPDHP25-201ENST00000447061 1001 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 NOP56P2-201ENST00000447491 769 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 TRY2P-201ENST00000448860 689 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL162388.1-201ENST00000450912 352 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 HMGB3P21-201ENST00000452483 547 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 RPL7P41-201ENST00000485823 957 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 RN7SL447P-201ENST00000494711 245 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC110760.3-202ENST00000515177 371 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL121594.4-201ENST00000556211 1196 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL049838.1-201ENST00000563647 981 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC005341.1-201ENST00000571086 708 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 MIR4760-201ENST00000585040 80 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC009597.2-201ENST00000604659 592 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL162431.4-201ENST00000604674 411 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 MIR92B-201ENST00000607575 96 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC090912.3-201ENST00000609775 533 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC096586.1-201ENST00000610267 561 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL161616.1-201ENST00000611867 286 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL118522.2-201ENST00000616045 615 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AC068831.8-201ENST00000620171 435 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AP006248.2-201ENST00000623309 592 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AP000648.2-201ENST00000624182 404 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL590396.4-201ENST00000636779 956 ntBASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM3Q53GG5 AL592182.3-201ENST00000642132 3304 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC083843.3-201ENST00000623679 2186 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC011493.1-201ENST00000596753 1632 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 MAPK10-349ENST00000641767 3661 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 MCTS2P-201ENST00000394552 546 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC009237.10-201ENST00000414112 510 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC009237.5-201ENST00000414271 501 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 UBE2V1P9-201ENST00000414760 368 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 MTND4P11-201ENST00000417020 1058 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 RPL7P29-201ENST00000437151 728 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC000041.1-201ENST00000439655 175 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC004854.1-201ENST00000440356 349 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 HSFY3P-201ENST00000444242 1191 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 TPTE2P6-202ENST00000445572 1007 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 BX284632.1-201ENST00000478218 541 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 OR5AN2P-201ENST00000534535 896 ntBASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM3Q53GG5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms