Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC090971.4-201ENST00000560291 1800 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 RNU6-272P-201ENST00000411028 104 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 RNU6-575P-201ENST00000411326 105 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC092648.1-201ENST00000425870 423 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 MTND2P5-201ENST00000432656 1006 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 ELOCP11-201ENST00000436690 332 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 ELOCP16-201ENST00000444494 332 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 RHEBP2-201ENST00000450289 600 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC096992.1-201ENST00000459808 709 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AL133445.1-201ENST00000467051 452 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC020898.1-201ENST00000474167 787 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 RPS4XP1-201ENST00000482189 787 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC005412.2-201ENST00000492004 341 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC097173.1-201ENST00000505862 819 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC023632.1-201ENST00000518463 375 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC134698.5-201ENST00000519444 336 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 MTND1P24-201ENST00000552175 861 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC044913.1-201ENST00000557200 430 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC011453.2-201ENST00000603737 729 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC091488.1-201ENST00000604239 660 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC099676.1-201ENST00000608886 657 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC009237.15-201ENST00000610252 501 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 MIR8069-1-201ENST00000616627 86 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 MIR8069-2-201ENST00000621412 86 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC092747.4-201ENST00000620519 1861 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 CIR1P2-201ENST00000514821 1342 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 RARSP1-201ENST00000542842 1418 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC38Q502W7 RN7SKP224-201ENST00000364140 325 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 RNA5SP132-201ENST00000364725 118 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 RNA5SP90-201ENST00000364801 99 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL079342.2-201ENST00000403367 482 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC013429.2-201ENST00000418798 781 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 PAICSP7-201ENST00000419829 962 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC004865.1-201ENST00000442276 1003 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC233982.1-201ENST00000451247 436 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 GAPDHP39-201ENST00000481866 979 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 NIP7P2-201ENST00000485801 544 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 OR4A2P-201ENST00000527276 913 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 OR8K4P-201ENST00000534608 872 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL138478.1-201ENST00000612252 832 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.25□□□□□ -1.57
CCDC38Q502W7 AL121895.2-201ENST00000619558 447 ntBASIC5.25□□□□□ -1.57
CCDC38Q502W7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms