Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.4□□□□□ -1.7
SIX1Q15475 OR56B2P-202ENST00000641377 2453 ntBASIC4.4□□□□□ -1.7
SIX1Q15475 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SIX1Q15475 MFSD8-216ENST00000641147 4009 ntBASIC4.4□□□□□ -1.7
SIX1Q15475 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIX1Q15475 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.7
SIX1Q15475 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.4□□□□□ -1.7
SIX1Q15475 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.4□□□□□ -1.7
SIX1Q15475 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SIX1Q15475 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 OR4K15-201ENST00000305051 1216 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 RNVU1-6-201ENST00000364688 164 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.4□□□□□ -1.71
SIX1Q15475 AC004552.1-201ENST00000419089 348 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 MTND4P24-201ENST00000424002 397 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AL157831.1-201ENST00000426134 473 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC023141.6-201ENST00000429418 337 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC007563.3-201ENST00000433233 371 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.4□□□□□ -1.71
SIX1Q15475 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 SNRPFP2-201ENST00000440710 251 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 PTMAP3-201ENST00000447474 330 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 MTND6P32-201ENST00000457611 483 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 RPS26P3-201ENST00000470205 348 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC090543.2-201ENST00000483963 348 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC004057.1-201ENST00000485827 348 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.4□□□□□ -1.71
SIX1Q15475 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.4□□□□□ -1.71
SIX1Q15475 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SIX1Q15475 AP001804.2-201ENST00000533932 910 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.4□□□□□ -1.71
SIX1Q15475 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.4□□□□□ -1.71
SIX1Q15475 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 OR1AB1P-201ENST00000585564 761 ntBASIC4.4□□□□□ -1.71
SIX1Q15475 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.4□□□□□ -1.71
SIX1Q15475 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SIX1Q15475 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.4□□□□□ -1.71
SIX1Q15475 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SIX1Q15475 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.4□□□□□ -1.71
SIX1Q15475 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX1Q15475 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX1Q15475 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX1Q15475 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SIX1Q15475 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX1Q15475 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX1Q15475 SNORA56-201ENST00000383966 129 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 LAP3P1-201ENST00000403648 294 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX1Q15475 AC006065.1-201ENST00000422539 802 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 NANOGP6-201ENST00000429190 847 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 SDR42E1P3-201ENST00000438345 502 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 XKRY2-201ENST00000442362 1093 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX1Q15475 HMGB3P22-202ENST00000451823 572 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC096741.1-201ENST00000472250 846 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC093890.1-201ENST00000502554 540 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC106806.2-201ENST00000509365 500 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX1Q15475 AP000859.1-201ENST00000525536 307 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SIX1Q15475 TRAV8-5-201ENST00000537369 341 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 CR383656.14-201ENST00000551951 406 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC016542.1-201ENST00000608259 493 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 CR589904.2-201ENST00000612533 440 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC253576.2-201ENST00000618815 580 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AL133370.2-201ENST00000619934 439 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC095038.2-201ENST00000621464 1070 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX1Q15475 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 AC011503.2-201ENST00000594230 1500 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX1Q15475 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX1Q15475 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX1Q15475 AC000123.3-201ENST00000624029 4975 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SIX1Q15475 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms