Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 AL023881.1-201ENST00000621088 301 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXF1Q12946 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC016588.2-201ENST00000632484 3021 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXF1Q12946 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXF1Q12946 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 ERCC6-202ENST00000374127 1782 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXF1Q12946 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
FOXF1Q12946 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXF1Q12946 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXF1Q12946 SNORD74.4-201ENST00000364129 80 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 GCNT6-201ENST00000379591 934 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 PGBD4P8-201ENST00000412993 562 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 FCF1P7-201ENST00000451185 558 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 RPL7P19-201ENST00000469948 618 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 RN7SL585P-201ENST00000470538 280 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC006517.1-201ENST00000480485 328 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 NPM1P6-201ENST00000521088 871 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 OR7E10P-201ENST00000526420 991 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 RPL23AP87-202ENST00000573039 466 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXF1Q12946 RN7SL600P-201ENST00000581811 299 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 OR1AB1P-201ENST00000585564 761 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXF1Q12946 AC124856.1-201ENST00000600819 896 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC133552.5-201ENST00000604266 540 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AL451044.1-201ENST00000604867 238 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AL590392.1-201ENST00000604960 446 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AC090246.1-201ENST00000616499 426 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 MIR6810-201ENST00000622701 70 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXF1Q12946 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 AP000756.2-201ENST00000624168 2567 ntBASIC3.73□□□□□ -1.81
FOXF1Q12946 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXF1Q12946 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
FOXF1Q12946 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC011266.1-201ENST00000624119 3569 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 OR11H4-201ENST00000315409 1082 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AL121657.1-201ENST00000327215 531 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 SNORD35B-201ENST00000363660 87 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 RN7SKP224-201ENST00000364140 325 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 SNORA70C-201ENST00000384538 135 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 RPS26P8-201ENST00000393490 348 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC108032.1-201ENST00000416706 207 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 MRPL50P1-201ENST00000431951 384 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 RPS4XP4-201ENST00000443195 763 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AL451050.1-201ENST00000450126 415 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 RPL38P1-201ENST00000460914 211 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 PPIAP21-201ENST00000464473 501 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 HPRT1P2-201ENST00000505250 544 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AC017037.1-201ENST00000508460 471 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 VWA8P1-201ENST00000510889 176 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC090281.1-201ENST00000523019 276 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC025884.1-201ENST00000556034 378 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC010547.7-201ENST00000570323 333 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXF1Q12946 AC114878.2-201ENST00000604863 1251 ntBASIC3.72□□□□□ -1.81
FOXF1Q12946 AC023043.4-201ENST00000612081 449 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms