Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SYCNQ0VAF6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SYCNQ0VAF6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYCNQ0VAF6 MTND4P31-201ENST00000425607 1343 ntBASIC3.09□□□□□ -1.91
SYCNQ0VAF6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SYCNQ0VAF6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYCNQ0VAF6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL355852.1-201ENST00000454081 1771 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 OR56B2P-201ENST00000317102 954 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 RNA5SP502-201ENST00000362694 119 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 Y_RNA.110-201ENST00000363220 99 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 GCNT6-201ENST00000379591 934 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 MIR1178-201ENST00000408396 91 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 RNA5SP146-201ENST00000410743 123 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 RNU2-72P-201ENST00000411175 163 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 COX6B1P1-201ENST00000415962 213 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 VN1R42P-201ENST00000424651 344 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC073069.1-201ENST00000428657 441 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC007559.1-201ENST00000428736 355 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 DYNLL1P7-201ENST00000429273 258 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 RPL12P28-201ENST00000430852 489 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC005189.1-201ENST00000431286 310 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ARL5AP2-201ENST00000444698 533 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 Z80107.2-201ENST00000445127 392 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 EEF1A1P1-201ENST00000447052 739 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL935212.3-201ENST00000450729 284 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CYCSP42-201ENST00000450823 238 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC079168.2-201ENST00000453977 416 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC006511.1-201ENST00000470614 315 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 RPS4XP14-201ENST00000493072 781 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC108022.1-201ENST00000493466 478 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 OR5M14P-201ENST00000506803 618 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC008628.1-201ENST00000508663 265 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 OR5AK3P-201ENST00000527486 1297 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC021006.3-201ENST00000530771 192 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 GCSHP4-201ENST00000538792 439 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC068446.3-201ENST00000555285 382 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 GLRXP2-201ENST00000555594 321 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC084757.1-201ENST00000559987 490 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC104229.1-201ENST00000561364 255 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 BGLT3-201ENST00000564523 994 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC115085.1-201ENST00000588924 229 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 HMGB2P1-201ENST00000591146 634 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC092474.3-201ENST00000603022 568 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL391358.1-201ENST00000605342 190 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 OR2BH1P-201ENST00000608850 864 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC006946.3-201ENST00000609791 756 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL512624.1-201ENST00000613638 469 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 CR392039.4-201ENST00000624968 501 ntBASIC3.08□□□□□ -1.92
SYCNQ0VAF6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.08□□□□□ -1.92
SYCNQ0VAF6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms