Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ABCF2P2-201ENST00000450549 296 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.98□□□□□ -1.61
GABPAQ06546 UBTFL6-201ENST00000477929 1024 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
GABPAQ06546 AL132838.2-201ENST00000492041 314 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.98□□□□□ -1.61
GABPAQ06546 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.98□□□□□ -1.61
GABPAQ06546 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 AL133370.2-201ENST00000619934 439 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AC019278.1-201ENST00000623516 479 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AC112484.5-201ENST00000624189 228 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.98□□□□□ -1.61
GABPAQ06546 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 TTC39DP-201ENST00000416781 1688 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.98□□□□□ -1.61
GABPAQ06546 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
GABPAQ06546 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GABPAQ06546 RNA5SP388-201ENST00000362584 119 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 RNA5SP283-201ENST00000365604 119 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 RNU6-1263P-201ENST00000384601 106 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 MIR195-201ENST00000385194 87 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 MT-RNR1-201ENST00000389680 954 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 ENSAP1-201ENST00000392855 326 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.97□□□□□ -1.61
GABPAQ06546 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.97□□□□□ -1.61
GABPAQ06546 AC106901.1-201ENST00000425086 698 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AL117339.2-201ENST00000430475 180 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.97□□□□□ -1.61
GABPAQ06546 BUD31P2-201ENST00000449374 300 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.97□□□□□ -1.61
GABPAQ06546 BNIP3P41-201ENST00000503774 571 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.97□□□□□ -1.61
GABPAQ06546 DYNLL1P4-201ENST00000549314 266 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.97□□□□□ -1.61
GABPAQ06546 AC106785.1-201ENST00000565935 262 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.97□□□□□ -1.61
GABPAQ06546 MTND2P13-201ENST00000577438 1039 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.97□□□□□ -1.61
GABPAQ06546 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 AP001642.1-201ENST00000624727 2117 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GABPAQ06546 SAMMSON-213ENST00000641336 1521 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 AC027228.2-201ENST00000567141 2154 ntBASIC4.97□□□□□ -1.61
GABPAQ06546 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC139713.2-215ENST00000641428 5037 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 RPL32P23-201ENST00000397237 405 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 KCTD10P1-201ENST00000434203 625 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 AC114878.1-201ENST00000441166 358 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.96□□□□□ -1.62
GABPAQ06546 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 OR4V1P-201ENST00000525394 1140 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 AP000859.1-201ENST00000525536 307 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.96□□□□□ -1.62
GABPAQ06546 SNORD39.2-201ENST00000579995 76 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 HMGB1P51-201ENST00000605166 638 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 AL118508.4-201ENST00000624142 1176 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC119674.1-220ENST00000641502 1048 ntBASIC4.96□□□□□ -1.62
GABPAQ06546 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GABPAQ06546 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GABPAQ06546 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.96□□□□□ -1.62
GABPAQ06546 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GABPAQ06546 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GABPAQ06546 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
GABPAQ06546 OR5T3-201ENST00000303059 1023 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GABPAQ06546 RN7SKP74-201ENST00000362849 309 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms