Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.86□□□□□ -1.63
RAE1P78406 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.86□□□□□ -1.63
RAE1P78406 COX6CP13-201ENST00000428703 226 ntBASIC4.86□□□□□ -1.63
RAE1P78406 OR52B5P-201ENST00000435337 951 ntBASIC4.86□□□□□ -1.63
RAE1P78406 MTND3P1-201ENST00000441336 220 ntBASIC4.86□□□□□ -1.63
RAE1P78406 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 MTCO2P25-201ENST00000447065 681 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.86□□□□□ -1.63
RAE1P78406 AC009127.1-201ENST00000467090 155 ntBASIC4.86□□□□□ -1.63
RAE1P78406 VPS26AP1-201ENST00000483197 979 ntBASIC4.86□□□□□ -1.63
RAE1P78406 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.86□□□□□ -1.63
RAE1P78406 AC073358.1-201ENST00000505671 684 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC104090.1-201ENST00000506341 1171 ntBASIC4.86□□□□□ -1.63
RAE1P78406 BX510359.5-201ENST00000515651 304 ntBASIC4.86□□□□□ -1.63
RAE1P78406 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.86□□□□□ -1.63
RAE1P78406 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.86□□□□□ -1.63
RAE1P78406 AC024940.3-201ENST00000538551 316 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AL049779.2-201ENST00000553847 315 ntBASIC4.86□□□□□ -1.63
RAE1P78406 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.86□□□□□ -1.63
RAE1P78406 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 AC090751.1-201ENST00000566966 267 ntBASIC4.86□□□□□ -1.63
RAE1P78406 MTCYBP33-201ENST00000575007 1130 ntBASIC4.86□□□□□ -1.63
RAE1P78406 MIR4675-201ENST00000577898 77 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 AL451074.6-201ENST00000608512 729 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC121761.2-201ENST00000617300 689 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC018926.3-201ENST00000618841 406 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC079248.2-201ENST00000623779 326 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AP000648.2-201ENST00000624182 404 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC015726.3-201ENST00000624501 418 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 OR52B5P-202ENST00000641118 1110 ntBASIC4.86□□□□□ -1.63
RAE1P78406 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 AC096656.1-201ENST00000623826 1364 ntBASIC4.86□□□□□ -1.63
RAE1P78406 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 AC104623.2-202ENST00000623477 4002 ntBASIC4.86□□□□□ -1.63
RAE1P78406 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 AL606537.1-201ENST00000607258 2011 ntBASIC4.85□□□□□ -1.63
RAE1P78406 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RAE1P78406 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
RAE1P78406 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 AC063976.2-201ENST00000425667 3556 ntBASIC4.85□□□□□ -1.63
RAE1P78406 FAM3C2-201ENST00000312214 681 ntBASIC4.85□□□□□ -1.63
RAE1P78406 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 TAF9BP1-201ENST00000396646 746 ntBASIC4.85□□□□□ -1.63
RAE1P78406 ATP5F1P3-201ENST00000397213 657 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.85□□□□□ -1.63
RAE1P78406 RPL7P4-203ENST00000430239 730 ntBASIC4.85□□□□□ -1.63
RAE1P78406 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 CBX1P4-201ENST00000439415 457 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC092809.1-201ENST00000441469 474 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 TPTE2P6-202ENST00000445572 1007 ntBASIC4.85□□□□□ -1.63
RAE1P78406 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 RPL5P24-201ENST00000463742 885 ntBASIC4.85□□□□□ -1.63
RAE1P78406 RN7SL443P-201ENST00000464331 290 ntBASIC4.85□□□□□ -1.63
RAE1P78406 RPS3AP43-201ENST00000479743 781 ntBASIC4.85□□□□□ -1.63
RAE1P78406 GAPDHP36-201ENST00000480688 918 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC108734.3-201ENST00000481241 1165 ntBASIC4.85□□□□□ -1.63
RAE1P78406 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 RPS21P4-201ENST00000487122 248 ntBASIC4.85□□□□□ -1.63
RAE1P78406 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 RN7SL441P-201ENST00000492388 296 ntBASIC4.85□□□□□ -1.63
RAE1P78406 DYNLL1P6-201ENST00000503440 264 ntBASIC4.85□□□□□ -1.63
RAE1P78406 WBP1LP4-201ENST00000505043 344 ntBASIC4.85□□□□□ -1.63
RAE1P78406 IGBP1P5-201ENST00000507524 1000 ntBASIC4.85□□□□□ -1.63
RAE1P78406 MTCYBP16-201ENST00000509187 1129 ntBASIC4.85□□□□□ -1.63
RAE1P78406 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 AC105185.1-201ENST00000518705 535 ntBASIC4.85□□□□□ -1.63
RAE1P78406 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 AC090819.1-201ENST00000523800 1111 ntBASIC4.85□□□□□ -1.63
RAE1P78406 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 ELOCP32-201ENST00000548625 324 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms