Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LSM6P62312 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
LSM6P62312 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LSM6P62312 MAPK10-253ENST00000641010 4072 ntBASIC3.81□□□□□ -1.8
LSM6P62312 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LSM6P62312 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LSM6P62312 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LSM6P62312 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LSM6P62312 AL132640.2-201ENST00000559968 1698 ntBASIC3.81□□□□□ -1.8
LSM6P62312 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LSM6P62312 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LSM6P62312 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 AC007529.1-201ENST00000418574 2178 ntBASIC3.8□□□□□ -1.8
LSM6P62312 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.8□□□□□ -1.8
LSM6P62312 AC012618.3-205ENST00000637896 1496 ntBASIC3.8□□□□□ -1.8
LSM6P62312 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LSM6P62312 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LSM6P62312 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 MIR3074-201ENST00000384885 81 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC097374.1-203ENST00000400783 485 ntBASIC3.8□□□□□ -1.8
LSM6P62312 RNU6-233P-201ENST00000410845 141 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.8□□□□□ -1.8
LSM6P62312 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
LSM6P62312 LYPLA1P1-201ENST00000434514 622 ntBASIC3.8□□□□□ -1.8
LSM6P62312 MAPRE1P3-201ENST00000435438 796 ntBASIC3.8□□□□□ -1.8
LSM6P62312 TXNP2-201ENST00000443918 295 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM6P62312 AC069277.2-201ENST00000454211 432 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AL133477.1-201ENST00000457472 514 ntBASIC3.8□□□□□ -1.8
LSM6P62312 RNU6-1218P-201ENST00000458990 108 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC079804.1-201ENST00000461922 436 ntBASIC3.8□□□□□ -1.8
LSM6P62312 RPL23AP72-201ENST00000492447 435 ntBASIC3.8□□□□□ -1.8
LSM6P62312 RN7SL810P-201ENST00000493031 276 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 AC146944.2-203ENST00000502493 354 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.8□□□□□ -1.8
LSM6P62312 AC111000.3-201ENST00000508057 576 ntBASIC3.8□□□□□ -1.8
LSM6P62312 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LSM6P62312 AC139495.1-202ENST00000513164 354 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 AC006064.5-201ENST00000541782 248 ntBASIC3.8□□□□□ -1.8
LSM6P62312 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM6P62312 AC135001.1-201ENST00000544546 283 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AL109766.1-201ENST00000555080 552 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC124068.1-201ENST00000563131 678 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.8□□□□□ -1.8
LSM6P62312 AC020915.5-201ENST00000596836 964 ntBASIC3.8□□□□□ -1.8
LSM6P62312 RPL12P25-202ENST00000598100 674 ntBASIC3.8□□□□□ -1.8
LSM6P62312 SNX6P1-201ENST00000601728 1224 ntBASIC3.8□□□□□ -1.8
LSM6P62312 PSMA6P4-201ENST00000603247 718 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC005191.1-201ENST00000603950 358 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC113403.1-201ENST00000604910 193 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC090948.1-201ENST00000607464 549 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC140479.6-201ENST00000633535 357 ntBASIC3.8□□□□□ -1.8
LSM6P62312 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LSM6P62312 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LSM6P62312 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
LSM6P62312 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM6P62312 MFSD8-216ENST00000641147 4009 ntBASIC3.79□□□□□ -1.8
LSM6P62312 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
LSM6P62312 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LSM6P62312 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
LSM6P62312 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LSM6P62312 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
LSM6P62312 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.79□□□□□ -1.8
LSM6P62312 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 MIR192-201ENST00000384915 110 ntBASIC3.79□□□□□ -1.8
LSM6P62312 MIR513A2-201ENST00000385249 127 ntBASIC3.79□□□□□ -1.8
LSM6P62312 RPL23AP59-201ENST00000399415 461 ntBASIC3.79□□□□□ -1.8
LSM6P62312 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 RPS4XP9-201ENST00000405151 780 ntBASIC3.79□□□□□ -1.8
LSM6P62312 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM6P62312 TRGV6-201ENST00000417928 299 ntBASIC3.79□□□□□ -1.8
LSM6P62312 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 AC073464.3-201ENST00000422564 712 ntBASIC3.79□□□□□ -1.8
LSM6P62312 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM6P62312 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM6P62312 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM6P62312 RPL23AP81-201ENST00000455252 467 ntBASIC3.79□□□□□ -1.8
LSM6P62312 MTND2P28-201ENST00000457540 1044 ntBASIC3.79□□□□□ -1.8
LSM6P62312 RPL7P22-201ENST00000466005 733 ntBASIC3.79□□□□□ -1.8
LSM6P62312 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms