Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LSM3P62310 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM3P62310 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LSM3P62310 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM3P62310 AL356489.2-201ENST00000566968 3528 ntBASIC3.51□□□□□ -1.85
LSM3P62310 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 MIR298-201ENST00000401212 88 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AL391361.1-201ENST00000405580 489 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AL512430.2-201ENST00000406786 339 ntBASIC3.51□□□□□ -1.85
LSM3P62310 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 ARL2BPP10-201ENST00000446487 531 ntBASIC3.51□□□□□ -1.85
LSM3P62310 RPSAP50-201ENST00000481955 852 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC011005.3-201ENST00000491624 395 ntBASIC3.51□□□□□ -1.85
LSM3P62310 RPS27AP16-201ENST00000492222 470 ntBASIC3.51□□□□□ -1.85
LSM3P62310 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM3P62310 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 KCTD9P6-201ENST00000522306 950 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC105233.3-201ENST00000531125 744 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.51□□□□□ -1.85
LSM3P62310 EDDM3DP-201ENST00000554692 434 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
LSM3P62310 HMGB3P26-201ENST00000560051 582 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC091042.1-201ENST00000579213 173 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 ELOCP28-201ENST00000590044 317 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM3P62310 AC004825.2-201ENST00000616634 455 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AC026124.2-201ENST00000621847 656 ntBASIC3.51□□□□□ -1.85
LSM3P62310 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM3P62310 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
LSM3P62310 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 AC116667.1-201ENST00000604855 2072 ntBASIC3.51□□□□□ -1.85
LSM3P62310 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM3P62310 AL450326.2-201ENST00000421913 1962 ntBASIC3.51□□□□□ -1.85
LSM3P62310 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM3P62310 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM3P62310 RIOK3P1-201ENST00000418778 1528 ntBASIC3.5□□□□□ -1.85
LSM3P62310 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM3P62310 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM3P62310 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM3P62310 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 AL162591.2-201ENST00000449634 317 ntBASIC3.5□□□□□ -1.85
LSM3P62310 OR52Y1P-201ENST00000452418 828 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC091685.2-201ENST00000454924 864 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM3P62310 SETP20-201ENST00000457046 852 ntBASIC3.5□□□□□ -1.85
LSM3P62310 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 PPIAP15-201ENST00000479662 484 ntBASIC3.5□□□□□ -1.85
LSM3P62310 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM3P62310 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM3P62310 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC091515.1-201ENST00000548110 679 ntBASIC3.5□□□□□ -1.85
LSM3P62310 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 AGGF1P8-201ENST00000562979 1000 ntBASIC3.5□□□□□ -1.85
LSM3P62310 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
LSM3P62310 MIR4644-201ENST00000579929 84 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC244505.7-201ENST00000599675 272 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC087468.1-201ENST00000604365 630 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM3P62310 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
LSM3P62310 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM3P62310 AL158163.1-201ENST00000603915 1649 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC090017.1-201ENST00000548612 1779 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC093909.5-201ENST00000621839 1799 ntBASIC3.5□□□□□ -1.85
LSM3P62310 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM3P62310 SDAD1P1-202ENST00000524156 2051 ntBASIC3.5□□□□□ -1.85
LSM3P62310 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
LSM3P62310 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM3P62310 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM3P62310 CASC19-284ENST00000642142 1868 ntBASIC3.5□□□□□ -1.85
LSM3P62310 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
LSM3P62310 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 RAD17P1-201ENST00000418130 2042 ntBASIC3.49□□□□□ -1.85
LSM3P62310 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LSM3P62310 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
LSM3P62310 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM3P62310 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM3P62310 RPL7AP73-201ENST00000413490 353 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms