Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SNORA11F-201ENST00000408237 128 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RN7SKP199-201ENST00000410325 305 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RNA5SP44-201ENST00000410446 133 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RPS20P14-201ENST00000412545 360 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AC009302.1-201ENST00000417147 390 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 ARAFP1-201ENST00000422172 605 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RPL7L1P1-201ENST00000448259 785 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AC069277.2-201ENST00000454211 432 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AC091959.2-201ENST00000477363 321 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 NPM1P29-201ENST00000483112 803 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RPS27AP13-201ENST00000498403 237 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.21□□□□□ -1.74
CLDN6P56747 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN6P56747 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN6P56747 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 ADAD1P2-201ENST00000588476 646 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 RPL7P50-201ENST00000600588 727 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 AL161729.3-201ENST00000603533 673 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 IMMP1LP1-201ENST00000605170 488 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 SNORD91B-202ENST00000608459 222 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLDN6P56747 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN6P56747 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CLDN6P56747 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN6P56747 LINC00622-201ENST00000562811 1570 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN6P56747 RNU1-83P-201ENST00000363426 164 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 SDHCP2-201ENST00000398565 501 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AC097374.1-203ENST00000400783 485 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 RPL6P29-201ENST00000414863 865 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 COX6B1P7-201ENST00000430845 235 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 RPS26P2-201ENST00000440331 348 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN6P56747 RPL35P6-201ENST00000490024 372 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN6P56747 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN6P56747 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 NPM1P41-201ENST00000512920 831 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN6P56747 OR8X1P-201ENST00000534542 869 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.2□□□□□ -1.74
CLDN6P56747 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CLDN6P56747 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN6P56747 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN6P56747 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN6P56747 AC244100.1-202ENST00000621554 382 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 AC039056.2-201ENST00000622261 511 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN6P56747 AC021242.1-201ENST00000507315 2035 ntBASIC4.2□□□□□ -1.74
CLDN6P56747 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLDN6P56747 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN6P56747 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLDN6P56747 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN6P56747 AL355852.1-201ENST00000454081 1771 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN6P56747 RNU6-178P-201ENST00000384631 104 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 RPL17P50-201ENST00000396131 546 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN6P56747 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 RPL23AP4-201ENST00000427757 463 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.19□□□□□ -1.74
CLDN6P56747 MTND6P18-201ENST00000439477 513 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC099063.2-201ENST00000446360 662 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.19□□□□□ -1.74
CLDN6P56747 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 CCNHP1-201ENST00000513311 678 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC025857.1-201ENST00000525252 377 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 OR5BC1P-201ENST00000529327 739 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AC105233.3-201ENST00000531125 744 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 MIR4286-201ENST00000580651 93 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms