Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU5B-1-201ENST00000363286 116 ntBASIC4.4□□□□□ -1.71
CDH11P55287 MIR142-201ENST00000384835 87 ntBASIC4.4□□□□□ -1.71
CDH11P55287 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH11P55287 AC013404.1-201ENST00000413068 249 ntBASIC4.4□□□□□ -1.71
CDH11P55287 CHEK2P3-201ENST00000416118 248 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH11P55287 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH11P55287 AC093422.3-201ENST00000428506 305 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH11P55287 Z80107.2-201ENST00000445127 392 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AC073587.1-201ENST00000447093 876 ntBASIC4.4□□□□□ -1.71
CDH11P55287 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 AC008280.2-201ENST00000455473 307 ntBASIC4.4□□□□□ -1.71
CDH11P55287 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
CDH11P55287 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH11P55287 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 AC113430.1-201ENST00000506872 718 ntBASIC4.4□□□□□ -1.71
CDH11P55287 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 SNORA19.3-201ENST00000516165 130 ntBASIC4.4□□□□□ -1.71
CDH11P55287 RNA5SP360-201ENST00000516555 118 ntBASIC4.4□□□□□ -1.71
CDH11P55287 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH11P55287 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 NMNAT1P1-201ENST00000554095 876 ntBASIC4.4□□□□□ -1.71
CDH11P55287 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH11P55287 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 MIR4480-201ENST00000582492 71 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH11P55287 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH11P55287 AL121890.2-201ENST00000617644 465 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AL121890.3-201ENST00000618494 516 ntBASIC4.4□□□□□ -1.71
CDH11P55287 AC073569.3-201ENST00000619055 682 ntBASIC4.4□□□□□ -1.71
CDH11P55287 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 AC005332.5-201ENST00000591222 2919 ntBASIC4.4□□□□□ -1.71
CDH11P55287 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CDH11P55287 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH11P55287 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 AC093775.1-201ENST00000624154 1868 ntBASIC4.39□□□□□ -1.71
CDH11P55287 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CDH11P55287 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 RNU6-543P-201ENST00000362576 108 ntBASIC4.39□□□□□ -1.71
CDH11P55287 RN7SKP95-201ENST00000362860 303 ntBASIC4.39□□□□□ -1.71
CDH11P55287 RN7SKP115-201ENST00000363177 317 ntBASIC4.39□□□□□ -1.71
CDH11P55287 RN7SKP224-201ENST00000364140 325 ntBASIC4.39□□□□□ -1.71
CDH11P55287 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 AP002530.1-201ENST00000405705 684 ntBASIC4.39□□□□□ -1.71
CDH11P55287 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH11P55287 RBMY2KP-201ENST00000418221 992 ntBASIC4.39□□□□□ -1.71
CDH11P55287 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH11P55287 OR2AM1P-201ENST00000422137 422 ntBASIC4.39□□□□□ -1.71
CDH11P55287 FABP7P1-201ENST00000424004 391 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH11P55287 AL360081.1-201ENST00000428299 555 ntBASIC4.39□□□□□ -1.71
CDH11P55287 RHOT1P3-201ENST00000436571 331 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH11P55287 RPL34P20-201ENST00000442771 351 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AL137845.2-201ENST00000444292 988 ntBASIC4.39□□□□□ -1.71
CDH11P55287 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC092685.1-201ENST00000447960 1243 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH11P55287 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC096741.1-201ENST00000472250 846 ntBASIC4.39□□□□□ -1.71
CDH11P55287 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 AC018442.3-201ENST00000523025 183 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC079075.1-201ENST00000559543 878 ntBASIC4.39□□□□□ -1.71
CDH11P55287 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH11P55287 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH11P55287 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH11P55287 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 AP001160.4-201ENST00000596971 382 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH11P55287 AC022079.2-201ENST00000619739 566 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AL669942.2-201ENST00000620352 697 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC087385.3-201ENST00000620477 187 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC015804.1-201ENST00000622935 435 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AC112694.2-201ENST00000623697 768 ntBASIC4.39□□□□□ -1.71
CDH11P55287 AP001002.2-201ENST00000625137 386 ntBASIC4.39□□□□□ -1.71
CDH11P55287 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.39□□□□□ -1.71
CDH11P55287 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CDH11P55287 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
CDH11P55287 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH11P55287 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 GTF2H2B-203ENST00000508065 1432 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms