Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 UBE2D3P4-201ENST00000441973 436 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AC068135.1-201ENST00000446164 246 ntBASIC6.11□□□□□ -1.43
MRE11P49959 MRPL35P2-201ENST00000448009 511 ntBASIC6.11□□□□□ -1.43
MRE11P49959 GEMIN2P1-201ENST00000454246 752 ntBASIC6.11□□□□□ -1.43
MRE11P49959 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.11□□□□□ -1.43
MRE11P49959 RN7SL814P-201ENST00000487715 300 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AC022133.1-201ENST00000490961 571 ntBASIC6.11□□□□□ -1.43
MRE11P49959 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 MTCYBP37-201ENST00000510642 1133 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AC008837.1-201ENST00000511513 412 ntBASIC6.11□□□□□ -1.43
MRE11P49959 RNU5A-4P-201ENST00000516588 111 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.11□□□□□ -1.43
MRE11P49959 AL358913.1-201ENST00000554342 121 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.11□□□□□ -1.43
MRE11P49959 AP000769.2-201ENST00000602344 396 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AL020997.3-201ENST00000602843 359 ntBASIC6.11□□□□□ -1.43
MRE11P49959 AL592494.3-201ENST00000609485 464 ntBASIC6.11□□□□□ -1.43
MRE11P49959 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MRE11P49959 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MRE11P49959 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MRE11P49959 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.11□□□□□ -1.43
MRE11P49959 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MRE11P49959 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.11□□□□□ -1.43
MRE11P49959 ZNF849P-201ENST00000594711 1566 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 RBPJP2-201ENST00000618187 1444 ntBASIC6.1□□□□□ -1.43
MRE11P49959 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MRE11P49959 AL159987.1-201ENST00000347911 293 ntBASIC6.1□□□□□ -1.43
MRE11P49959 RNU5A-2P-201ENST00000384337 116 ntBASIC6.1□□□□□ -1.43
MRE11P49959 RNU6-192P-201ENST00000391253 100 ntBASIC6.1□□□□□ -1.43
MRE11P49959 MCTS2P-201ENST00000394552 546 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AC009804.1-201ENST00000400949 179 ntBASIC6.1□□□□□ -1.43
MRE11P49959 GSTA8P-201ENST00000404253 637 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 AL596448.1-201ENST00000415024 392 ntBASIC6.1□□□□□ -1.43
MRE11P49959 SLC35E1P1-201ENST00000419313 864 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AL365203.2-201ENST00000423444 196 ntBASIC6.1□□□□□ -1.43
MRE11P49959 RPF2P1-201ENST00000424137 906 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AC127526.2-201ENST00000426436 775 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.1□□□□□ -1.43
MRE11P49959 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 PRPF38AP2-201ENST00000438179 851 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL138878.2-201ENST00000440581 1241 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 SEPT14P24-201ENST00000447236 180 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 AL445433.1-201ENST00000457507 257 ntBASIC6.1□□□□□ -1.43
MRE11P49959 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.1□□□□□ -1.43
MRE11P49959 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AC023161.2-201ENST00000551218 780 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.1□□□□□ -1.43
MRE11P49959 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.1□□□□□ -1.43
MRE11P49959 AC068790.6-201ENST00000602558 258 ntBASIC6.1□□□□□ -1.43
MRE11P49959 DEFB131E-202ENST00000602581 683 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AC005377.1-201ENST00000605126 456 ntBASIC6.1□□□□□ -1.43
MRE11P49959 OR2AS2P-201ENST00000606902 342 ntBASIC6.1□□□□□ -1.43
MRE11P49959 AL450489.1-201ENST00000612071 468 ntBASIC6.1□□□□□ -1.43
MRE11P49959 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 AC074140.1-201ENST00000621617 208 ntBASIC6.1□□□□□ -1.43
MRE11P49959 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
MRE11P49959 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.1□□□□□ -1.43
MRE11P49959 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
MRE11P49959 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 MUC2-202ENST00000613187 4845 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AL133268.1-201ENST00000405676 1401 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms