Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL12P48061 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL12P48061 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL12P48061 AL121772.2-201ENST00000614331 297 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AC084757.4-201ENST00000616350 526 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AC015908.5-201ENST00000623289 343 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AC008013.2-202ENST00000637965 364 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL12P48061 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL12P48061 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL12P48061 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL12P48061 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL12P48061 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL12P48061 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL12P48061 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL12P48061 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL12P48061 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL12P48061 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
CXCL12P48061 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 RPS3AP25-201ENST00000411660 793 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AC234781.4-201ENST00000419384 244 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AL691449.1-201ENST00000426570 421 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL12P48061 NOTCH2P1-201ENST00000443481 624 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL12P48061 FCF1P7-201ENST00000451185 558 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 AP002360.3-201ENST00000607673 710 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 AC019176.2-201ENST00000611579 315 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 AL354950.1-201ENST00000614150 568 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 AC015914.2-201ENST00000618167 288 ntBASIC4.2□□□□□ -1.74
CXCL12P48061 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL12P48061 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
CXCL12P48061 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL12P48061 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL12P48061 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL12P48061 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CXCL12P48061 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL12P48061 RNA5SP124-201ENST00000362739 110 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 SNORA73.2-201ENST00000364946 201 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 BMS1P3-201ENST00000372011 932 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 VDAC2P1-201ENST00000399358 958 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 MIR921-201ENST00000401133 56 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC093578.1-201ENST00000415219 368 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL12P48061 CDY14P-201ENST00000431260 1014 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL12P48061 CDY12P-201ENST00000440679 1015 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 CDY13P-201ENST00000445813 1015 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AL157884.3-201ENST00000448273 1184 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 CDY23P-201ENST00000451661 1014 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL12P48061 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL12P48061 ATP5G1P3-201ENST00000463301 410 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL12P48061 AC069304.1-201ENST00000491593 704 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 DSTNP2-201ENST00000504533 515 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC112184.1-201ENST00000505179 312 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 RNA5SP446-201ENST00000515955 82 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL12P48061 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL12P48061 AC006064.5-201ENST00000541782 248 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC093591.2-201ENST00000565254 3843 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL12P48061 AL592436.1-201ENST00000605135 558 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 AC006840.1-201ENST00000623069 542 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL12P48061 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL12P48061 AC011755.1-201ENST00000623763 2049 ntBASIC4.19□□□□□ -1.74
CXCL12P48061 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CXCL12P48061 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL12P48061 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL12P48061 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL12P48061 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CXCL12P48061 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL12P48061 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CXCL12P48061 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 SNORA79B-201ENST00000410557 148 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 SNORA57.3-201ENST00000411095 141 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 HSPE1P12-201ENST00000412576 301 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms