Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC007996.1-201ENST00000620414 2821 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AC093311.1-201ENST00000506586 2021 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.51□□□□□ -1.37
NFKB1P19838 BIN2P1-201ENST00000504996 1530 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC092162.3-201ENST00000624511 1624 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 OR9K1P-201ENST00000326513 941 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 RNU6-254P-201ENST00000363377 107 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RNU6-777P-201ENST00000364265 104 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RNA5SP85-201ENST00000365378 119 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 SNORD94-201ENST00000386037 137 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RN7SKP140-201ENST00000411196 284 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 SNRPFP1-201ENST00000414761 252 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 COX6CP17-201ENST00000421389 185 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL353678.1-201ENST00000422735 741 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 GPM6BP2-201ENST00000432046 144 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 AC023347.2-201ENST00000433994 462 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 RPS7P5-201ENST00000441482 581 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 CXCR2P1-202ENST00000443392 1074 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RPL17P49-201ENST00000443728 411 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 GPM6BP1-201ENST00000446387 144 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC063943.1-201ENST00000465434 453 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 RN7SL502P-201ENST00000481857 290 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC015524.1-201ENST00000491585 472 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RPS15AP36-201ENST00000492022 382 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC103851.1-201ENST00000506833 274 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC106800.3-201ENST00000511389 308 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RN7SKP13-201ENST00000515933 244 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RNU7-30P-201ENST00000516835 62 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.51□□□□□ -1.37
NFKB1P19838 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.51□□□□□ -1.37
NFKB1P19838 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NFKB1P19838 TPRX1P1-201ENST00000557620 319 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC034105.3-201ENST00000565294 442 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC122134.1-201ENST00000565664 1104 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 MIR4732-201ENST00000581873 76 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RN7SL475P-201ENST00000583379 298 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC004853.1-201ENST00000604902 698 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC113139.1-201ENST00000605049 239 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 MIR98-201ENST00000606724 119 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL161734.1-201ENST00000609720 557 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC105429.2-201ENST00000610567 517 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC024940.5-201ENST00000622889 474 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC068213.1-201ENST00000625124 226 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC134503.1-201ENST00000633048 54 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC135068.11-201ENST00000636378 921 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.51□□□□□ -1.37
NFKB1P19838 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 NMD3P1-201ENST00000439704 1488 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC108467.2-201ENST00000617640 1597 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC091305.2-201ENST00000624049 1576 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 AC011369.2-201ENST00000624423 1567 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.51□□□□□ -1.37
NFKB1P19838 AC110373.1-201ENST00000505994 3505 ntBASIC6.51□□□□□ -1.37
NFKB1P19838 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.51□□□□□ -1.37
NFKB1P19838 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NFKB1P19838 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NFKB1P19838 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NFKB1P19838 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NFKB1P19838 AC025574.1-201ENST00000554784 1653 ntBASIC6.5□□□□□ -1.37
NFKB1P19838 RLIMP2-201ENST00000427891 1563 ntBASIC6.5□□□□□ -1.37
NFKB1P19838 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms