Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 RNA5SP105-201ENST00000391123 113 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 RN7SKP182-201ENST00000410772 298 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 RNA5SP306-201ENST00000411087 107 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 PGBD4P8-201ENST00000412993 562 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 VDAC1P6-201ENST00000430062 855 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 MTND2P2-201ENST00000434633 945 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AL353597.2-202ENST00000434901 373 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AC069285.2-201ENST00000440210 275 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AL353748.1-201ENST00000440753 474 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 CEACAMP9-201ENST00000442990 513 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 CASP3P1-201ENST00000446037 609 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AC009963.2-201ENST00000453431 138 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.67□□□□□ -1.82
CTLA4P16410 RPL36AP13-201ENST00000457490 317 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 IGKV2-38-201ENST00000517443 247 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.67□□□□□ -1.82
CTLA4P16410 CDH12P4-201ENST00000517835 295 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 CDH12P3-201ENST00000517935 295 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 CDH12P1-201ENST00000518435 295 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 PDCD5P1-201ENST00000543528 309 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.67□□□□□ -1.82
CTLA4P16410 PSMB7P1-201ENST00000556349 514 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 MIR5096-201ENST00000583713 70 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 AC008745.1-201ENST00000604064 271 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AL589935.2-201ENST00000616471 1231 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 AL121890.3-201ENST00000618494 516 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.67□□□□□ -1.82
CTLA4P16410 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 BX005019.1-201ENST00000561881 1810 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.66□□□□□ -1.82
CTLA4P16410 AC010329.2-201ENST00000595195 2737 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 OR4K17-201ENST00000315543 1032 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AL161909.1-201ENST00000397390 712 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.66□□□□□ -1.82
CTLA4P16410 AC004690.1-201ENST00000418216 328 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC009480.2-201ENST00000422916 432 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 DNAJC19P7-201ENST00000428811 344 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC022022.1-201ENST00000430304 178 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.66□□□□□ -1.82
CTLA4P16410 ACTR3P2-201ENST00000439585 1257 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 RNA5SP246-201ENST00000458909 119 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 APOOP2-201ENST00000461561 539 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 CCDC75P1-201ENST00000469247 791 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 RN7SL303P-201ENST00000469773 251 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 KRT19P6-201ENST00000510983 209 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.66□□□□□ -1.82
CTLA4P16410 OR7E10P-201ENST00000526420 991 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 EIF4EP5-201ENST00000528228 640 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.66□□□□□ -1.82
CTLA4P16410 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.66□□□□□ -1.82
CTLA4P16410 AC079171.1-201ENST00000568788 914 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 RPL23AP87-202ENST00000573039 466 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC090312.1-201ENST00000580637 348 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 AC104785.1-201ENST00000603220 588 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AL139395.1-201ENST00000603662 160 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AC090948.2-201ENST00000607363 564 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 AL356274.1-201ENST00000617064 410 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 AP000843.1-201ENST00000624880 701 ntBASIC3.66□□□□□ -1.82
CTLA4P16410 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.66□□□□□ -1.82
CTLA4P16410 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.66□□□□□ -1.82
CTLA4P16410 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CTLA4P16410 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTLA4P16410 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.66□□□□□ -1.82
CTLA4P16410 AL133243.3-201ENST00000617415 3004 ntBASIC3.65□□□□□ -1.82
CTLA4P16410 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CTLA4P16410 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.65□□□□□ -1.82
CTLA4P16410 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTLA4P16410 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTLA4P16410 AC011155.1-201ENST00000316512 456 ntBASIC3.65□□□□□ -1.83
CTLA4P16410 RNA5SP513-201ENST00000364648 118 ntBASIC3.65□□□□□ -1.83
CTLA4P16410 RNA5SP366-201ENST00000365454 123 ntBASIC3.65□□□□□ -1.83
CTLA4P16410 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTLA4P16410 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms