Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCANP13611 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCANP13611 AC090337.1-201ENST00000579651 2074 ntBASIC4.04□□□□□ -1.76
VCANP13611 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.04□□□□□ -1.76
VCANP13611 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.04□□□□□ -1.76
VCANP13611 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.04□□□□□ -1.76
VCANP13611 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.04□□□□□ -1.76
VCANP13611 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.04□□□□□ -1.76
VCANP13611 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCANP13611 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCANP13611 MAPK10-371ENST00000641952 5209 ntBASIC4.04□□□□□ -1.76
VCANP13611 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VCANP13611 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 RNU6-729P-201ENST00000384399 107 ntBASIC4.03□□□□□ -1.76
VCANP13611 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.03□□□□□ -1.76
VCANP13611 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.03□□□□□ -1.76
VCANP13611 RPS3AP46-201ENST00000448352 682 ntBASIC4.03□□□□□ -1.76
VCANP13611 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
VCANP13611 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 AC244258.1-201ENST00000637553 1071 ntBASIC4.03□□□□□ -1.76
VCANP13611 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VCANP13611 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
VCANP13611 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VCANP13611 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 RPL23AP46-201ENST00000438548 490 ntBASIC4.03□□□□□ -1.76
VCANP13611 FCF1P7-201ENST00000451185 558 ntBASIC4.03□□□□□ -1.76
VCANP13611 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.03□□□□□ -1.76
VCANP13611 AC092747.2-201ENST00000545069 983 ntBASIC4.03□□□□□ -1.76
VCANP13611 AC005034.4-201ENST00000603612 899 ntBASIC4.03□□□□□ -1.76
VCANP13611 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.03□□□□□ -1.76
VCANP13611 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCANP13611 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
VCANP13611 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 MIR5004-201ENST00000579078 107 ntBASIC4.03□□□□□ -1.76
VCANP13611 HMGB2P1-201ENST00000591146 634 ntBASIC4.03□□□□□ -1.76
VCANP13611 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.03□□□□□ -1.76
VCANP13611 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
VCANP13611 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
VCANP13611 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
VCANP13611 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
VCANP13611 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 RNU6-7-201ENST00000364784 107 ntBASIC4.02□□□□□ -1.77
VCANP13611 RNU6-8-201ENST00000365467 107 ntBASIC4.02□□□□□ -1.77
VCANP13611 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 Z74696.2-201ENST00000436514 498 ntBASIC4.02□□□□□ -1.77
VCANP13611 RPL26P28-201ENST00000451325 435 ntBASIC4.02□□□□□ -1.77
VCANP13611 RPL38P1-201ENST00000460914 211 ntBASIC4.02□□□□□ -1.77
VCANP13611 RPL21P10-201ENST00000463521 490 ntBASIC4.02□□□□□ -1.77
VCANP13611 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.02□□□□□ -1.77
VCANP13611 AC002069.2-201ENST00000603580 883 ntBASIC4.02□□□□□ -1.77
VCANP13611 AC009159.1-201ENST00000618386 642 ntBASIC4.02□□□□□ -1.77
VCANP13611 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VCANP13611 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 AL079342.1-201ENST00000401460 267 ntBASIC4.02□□□□□ -1.77
VCANP13611 RPL21P91-201ENST00000429231 479 ntBASIC4.02□□□□□ -1.77
VCANP13611 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.02□□□□□ -1.77
VCANP13611 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 AC091516.1-201ENST00000549191 703 ntBASIC4.02□□□□□ -1.77
VCANP13611 MIR3162-201ENST00000581818 82 ntBASIC4.02□□□□□ -1.77
VCANP13611 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.02□□□□□ -1.77
VCANP13611 HMGB3P19-201ENST00000403971 560 ntBASIC4.02□□□□□ -1.77
VCANP13611 CEACAMP1-201ENST00000434624 1035 ntBASIC4.02□□□□□ -1.77
VCANP13611 AL157385.1-201ENST00000446973 268 ntBASIC4.02□□□□□ -1.77
VCANP13611 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 RNA5SP497-201ENST00000516081 97 ntBASIC4.02□□□□□ -1.77
VCANP13611 AC113192.3-201ENST00000529152 742 ntBASIC4.02□□□□□ -1.77
VCANP13611 AC009303.3-201ENST00000591103 736 ntBASIC4.02□□□□□ -1.77
VCANP13611 VN1R78P-201ENST00000597393 564 ntBASIC4.02□□□□□ -1.77
VCANP13611 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCANP13611 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VCANP13611 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VCANP13611 TTC3P1-201ENST00000399586 6081 ntBASIC4.01□□□□□ -1.77
VCANP13611 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms