Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.85□□□□□ -1.79
CCL4P13236 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CCL4P13236 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 ERCC6-202ENST00000374127 1782 ntBASIC3.85□□□□□ -1.79
CCL4P13236 MIR208A-201ENST00000362287 71 ntBASIC3.85□□□□□ -1.79
CCL4P13236 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
CCL4P13236 RAB9AP3-201ENST00000412737 573 ntBASIC3.85□□□□□ -1.79
CCL4P13236 UBTFL3-201ENST00000418934 1024 ntBASIC3.85□□□□□ -1.79
CCL4P13236 AC069157.1-201ENST00000421749 137 ntBASIC3.85□□□□□ -1.79
CCL4P13236 RAB9AP1-201ENST00000449393 573 ntBASIC3.85□□□□□ -1.79
CCL4P13236 AC092691.2-201ENST00000461787 803 ntBASIC3.85□□□□□ -1.79
CCL4P13236 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.85□□□□□ -1.79
CCL4P13236 UBTFL6-201ENST00000477929 1024 ntBASIC3.85□□□□□ -1.79
CCL4P13236 ACTR3P3-201ENST00000480448 893 ntBASIC3.85□□□□□ -1.79
CCL4P13236 AC012158.1-204ENST00000483430 465 ntBASIC3.85□□□□□ -1.79
CCL4P13236 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
CCL4P13236 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.85□□□□□ -1.79
CCL4P13236 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.85□□□□□ -1.79
CCL4P13236 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.85□□□□□ -1.79
CCL4P13236 AC114878.2-201ENST00000604863 1251 ntBASIC3.85□□□□□ -1.79
CCL4P13236 AL645927.2-201ENST00000618350 349 ntBASIC3.85□□□□□ -1.79
CCL4P13236 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
CCL4P13236 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCL4P13236 MTCO1P46-201ENST00000451639 1491 ntBASIC3.85□□□□□ -1.79
CCL4P13236 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.85□□□□□ -1.79
CCL4P13236 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCL4P13236 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
CCL4P13236 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL4P13236 SNORD35B-201ENST00000363660 87 ntBASIC3.84□□□□□ -1.79
CCL4P13236 SNORA73.2-201ENST00000364946 201 ntBASIC3.84□□□□□ -1.79
CCL4P13236 AL672167.2-201ENST00000377164 879 ntBASIC3.84□□□□□ -1.79
CCL4P13236 MIR195-201ENST00000385194 87 ntBASIC3.84□□□□□ -1.79
CCL4P13236 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.84□□□□□ -1.79
CCL4P13236 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.84□□□□□ -1.79
CCL4P13236 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 NOTCH2P1-201ENST00000443481 624 ntBASIC3.84□□□□□ -1.79
CCL4P13236 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.84□□□□□ -1.79
CCL4P13236 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.84□□□□□ -1.79
CCL4P13236 RN7SKP141-201ENST00000516167 338 ntBASIC3.84□□□□□ -1.79
CCL4P13236 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.84□□□□□ -1.79
CCL4P13236 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.84□□□□□ -1.79
CCL4P13236 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL4P13236 AC244100.1-202ENST00000621554 382 ntBASIC3.84□□□□□ -1.79
CCL4P13236 AC140113.4-201ENST00000622087 222 ntBASIC3.84□□□□□ -1.79
CCL4P13236 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCL4P13236 AP003400.2-201ENST00000624036 666 ntBASIC3.84□□□□□ -1.79
CCL4P13236 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL4P13236 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
CCL4P13236 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCL4P13236 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CCL4P13236 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCL4P13236 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCL4P13236 DDX18P6-201ENST00000450119 1997 ntBASIC3.83□□□□□ -1.8
CCL4P13236 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL4P13236 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 AC126323.6-202ENST00000568092 3511 ntBASIC3.83□□□□□ -1.8
CCL4P13236 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 RNA5SP387-201ENST00000364226 106 ntBASIC3.83□□□□□ -1.8
CCL4P13236 RNA5SP372-201ENST00000390836 115 ntBASIC3.83□□□□□ -1.8
CCL4P13236 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL4P13236 AL121878.1-201ENST00000418638 859 ntBASIC3.83□□□□□ -1.8
CCL4P13236 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL4P13236 RPL36AP13-201ENST00000457490 317 ntBASIC3.83□□□□□ -1.8
CCL4P13236 RPL7L1P8-201ENST00000469911 741 ntBASIC3.83□□□□□ -1.8
CCL4P13236 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL4P13236 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CCL4P13236 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
CCL4P13236 RNU6-352P-201ENST00000516908 107 ntBASIC3.83□□□□□ -1.8
CCL4P13236 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL4P13236 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL4P13236 AC012417.1-201ENST00000582307 1039 ntBASIC3.83□□□□□ -1.8
CCL4P13236 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL4P13236 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL4P13236 AC008759.1-201ENST00000589783 983 ntBASIC3.83□□□□□ -1.8
CCL4P13236 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL4P13236 AC015726.1-201ENST00000602353 681 ntBASIC3.83□□□□□ -1.8
CCL4P13236 AC008739.3-201ENST00000603262 127 ntBASIC3.83□□□□□ -1.8
CCL4P13236 AL451044.1-201ENST00000604867 238 ntBASIC3.83□□□□□ -1.8
CCL4P13236 AC138965.3-201ENST00000623875 498 ntBASIC3.83□□□□□ -1.8
CCL4P13236 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL4P13236 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL4P13236 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms