Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 AL512649.1-201ENST00000428997 581 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.7□□□□□ -1.5
COL6A2P12110 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.7□□□□□ -1.5
COL6A2P12110 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.7□□□□□ -1.5
COL6A2P12110 GAPDHP14-201ENST00000450472 937 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC104339.1-201ENST00000465478 348 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RPL30P9-201ENST00000465586 330 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RPS4XP15-201ENST00000489210 795 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RPS17P5-201ENST00000498293 408 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC113367.2-201ENST00000505749 160 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 SNX5P1-201ENST00000505757 1041 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 IMPA1P1-201ENST00000510718 842 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RNU6-885P-201ENST00000516607 104 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RNA5SP441-201ENST00000516809 88 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 GTF2IP22-201ENST00000554443 182 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC107958.1-201ENST00000556576 290 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC090751.1-201ENST00000566966 267 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC090236.2-201ENST00000587933 1101 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC012065.4-201ENST00000602445 679 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC009237.13-201ENST00000603193 276 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AL390816.3-201ENST00000604527 1066 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 AC138932.5-201ENST00000617759 563 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC018816.2-201ENST00000621460 353 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AL136228.1-201ENST00000622221 319 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL6A2P12110 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 AC011933.2-201ENST00000578539 2790 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 AL079343.1-201ENST00000572358 1771 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 MTCO1P23-201ENST00000415223 1526 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 AC135352.1-201ENST00000506173 1418 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.69□□□□□ -1.5
COL6A2P12110 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COL6A2P12110 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.69□□□□□ -1.5
COL6A2P12110 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 HMGN2P27-201ENST00000427352 270 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.69□□□□□ -1.5
COL6A2P12110 NEK4P1-201ENST00000433383 879 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 AC091862.1-201ENST00000438016 1100 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 YWHAQP9-201ENST00000445891 512 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 CFL1P4-201ENST00000451536 498 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AL358876.1-201ENST00000453364 1075 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 RPS23P2-201ENST00000463671 415 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AC091874.2-201ENST00000505889 720 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 AC116347.2-201ENST00000514912 523 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 MTCO1P30-201ENST00000515244 580 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 RNU6-1261P-201ENST00000517194 104 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 EIF4A2P5-201ENST00000529914 499 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 OR4A43P-201ENST00000532938 908 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 PSMB7P1-201ENST00000556349 514 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.69□□□□□ -1.5
COL6A2P12110 RPA2P1-201ENST00000556557 721 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 TRAV15-201ENST00000556680 249 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.69□□□□□ -1.5
COL6A2P12110 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL6A2P12110 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.69□□□□□ -1.5
COL6A2P12110 MIR6809-201ENST00000612189 116 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 uc_338.31-201ENST00000615595 186 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AL008636.1-201ENST00000625038 1018 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.69□□□□□ -1.5
COL6A2P12110 ATE1-AS1-202ENST00000636460 506 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms