Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
COL11A1P12107 SNORA11.1-201ENST00000408133 129 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL11A1P12107 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.57□□□□□ -1.68
COL11A1P12107 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.57□□□□□ -1.68
COL11A1P12107 IGLV3-26-201ENST00000520756 302 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.57□□□□□ -1.68
COL11A1P12107 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 NPM1P47-201ENST00000560843 856 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.57□□□□□ -1.68
COL11A1P12107 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.57□□□□□ -1.68
COL11A1P12107 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.57□□□□□ -1.68
COL11A1P12107 AL451044.1-201ENST00000604867 238 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.57□□□□□ -1.68
COL11A1P12107 AC069200.1-201ENST00000609511 323 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 AC012314.7-201ENST00000619693 93 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A1P12107 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A1P12107 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL11A1P12107 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.56□□□□□ -1.68
COL11A1P12107 AC068533.1-201ENST00000418542 415 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 FABP3P2-201ENST00000453169 399 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.56□□□□□ -1.68
COL11A1P12107 AC008155.2-201ENST00000464337 397 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 OR5D2P-201ENST00000524390 911 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
COL11A1P12107 AL160281.1-201ENST00000605307 311 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 BNIP3P41-202ENST00000616656 861 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.56□□□□□ -1.68
COL11A1P12107 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL11A1P12107 Z95327.2-201ENST00000414579 1873 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL11A1P12107 AL049781.1-201ENST00000623195 3585 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL11A1P12107 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.56□□□□□ -1.68
COL11A1P12107 RNU1-15P-201ENST00000353977 144 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 SNORA73.2-201ENST00000364946 201 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 U1.1-201ENST00000384101 164 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 MIR30B-201ENST00000384850 88 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.56□□□□□ -1.68
COL11A1P12107 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 RBMY1KP-201ENST00000423480 476 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.56□□□□□ -1.68
COL11A1P12107 OR9M1P-201ENST00000459641 921 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.56□□□□□ -1.68
COL11A1P12107 AC026782.2-201ENST00000510845 636 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.56□□□□□ -1.68
COL11A1P12107 SNORA74D-201ENST00000516404 141 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 IGKV2-23-201ENST00000518729 323 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AC087369.1-201ENST00000520775 996 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.56□□□□□ -1.68
COL11A1P12107 AC022968.1-201ENST00000567372 442 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AL451086.1-201ENST00000605596 223 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.56□□□□□ -1.68
COL11A1P12107 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.56□□□□□ -1.68
COL11A1P12107 AF001550.2-201ENST00000636643 217 ntBASIC4.56□□□□□ -1.68
COL11A1P12107 Z95331.1-201ENST00000623075 23112 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
COL11A1P12107 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
COL11A1P12107 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL11A1P12107 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
COL11A1P12107 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.55□□□□□ -1.68
COL11A1P12107 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL11A1P12107 AC097634.1-201ENST00000604491 2467 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
COL11A1P12107 RAB9AP3-201ENST00000412737 573 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AC009237.5-201ENST00000414271 501 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AL157884.3-201ENST00000448273 1184 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 RAB9AP1-201ENST00000449393 573 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AC092691.2-201ENST00000461787 803 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AP000619.3-201ENST00000535634 1127 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.55□□□□□ -1.68
COL11A1P12107 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.55□□□□□ -1.68
COL11A1P12107 RPL23AP87-202ENST00000573039 466 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 MIR3944-201ENST00000581277 108 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AC019176.2-201ENST00000611579 315 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 AC244100.1-202ENST00000621554 382 ntBASIC4.55□□□□□ -1.68
COL11A1P12107 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
COL11A1P12107 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL11A1P12107 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL11A1P12107 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL11A1P12107 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms