Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP2AP11388 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP2AP11388 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP2AP11388 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TOP2AP11388 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.92□□□□□ -1.3
TOP2AP11388 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.92□□□□□ -1.3
TOP2AP11388 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.92□□□□□ -1.3
TOP2AP11388 AC007967.1-201ENST00000455422 1159 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOP2AP11388 RPL21P7-201ENST00000557463 483 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AC012417.1-201ENST00000582307 1039 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AC244505.7-201ENST00000599675 272 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.92□□□□□ -1.3
TOP2AP11388 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOP2AP11388 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TOP2AP11388 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.92□□□□□ -1.3
TOP2AP11388 AC003985.2-201ENST00000562268 1669 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AP001273.1-201ENST00000624493 3152 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 AL672167.1-205ENST00000641112 3080 ntBASIC6.92□□□□□ -1.3
TOP2AP11388 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.91□□□□□ -1.3
TOP2AP11388 AC004656.1-201ENST00000568479 4951 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC073335.1-201ENST00000427776 363 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 PRDX3P3-201ENST00000447765 522 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 RPS17P13-201ENST00000448974 407 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 PLGLA-201ENST00000465668 449 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC006517.1-201ENST00000480485 328 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC012158.1-204ENST00000483430 465 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.91□□□□□ -1.3
TOP2AP11388 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.91□□□□□ -1.3
TOP2AP11388 AC104662.1-201ENST00000604448 511 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.91□□□□□ -1.3
TOP2AP11388 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP2AP11388 AL031666.3-201ENST00000609320 1006 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.91□□□□□ -1.3
TOP2AP11388 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP2AP11388 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP2AP11388 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TOP2AP11388 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP2AP11388 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
TOP2AP11388 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP2AP11388 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
TOP2AP11388 SNORD3H-201ENST00000384486 214 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 MIR483-201ENST00000385070 76 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 ATP5A1P2-201ENST00000412323 255 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.91□□□□□ -1.3
TOP2AP11388 RPS3AP12-201ENST00000443616 753 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 USP9YP2-201ENST00000504503 1000 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 USP9YP1-201ENST00000513521 1002 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 RN7SKP46-201ENST00000515942 234 ntBASIC6.91□□□□□ -1.3
TOP2AP11388 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.91□□□□□ -1.3
TOP2AP11388 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP2AP11388 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
TOP2AP11388 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP2AP11388 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP2AP11388 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP2AP11388 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP2AP11388 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP2AP11388 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TOP2AP11388 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.9□□□□□ -1.31
TOP2AP11388 SOD2P1-201ENST00000396543 562 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.9□□□□□ -1.31
TOP2AP11388 AC091390.3-201ENST00000426478 338 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 RPL7P24-201ENST00000493052 752 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 AC005726.1-201ENST00000494679 427 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.9□□□□□ -1.31
TOP2AP11388 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.9□□□□□ -1.31
TOP2AP11388 MIR3922-201ENST00000585192 84 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.9□□□□□ -1.31
TOP2AP11388 AC016957.2-201ENST00000616998 848 ntBASIC6.9□□□□□ -1.31
TOP2AP11388 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TOP2AP11388 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
TOP2AP11388 AP000641.1-201ENST00000531988 1639 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TOP2AP11388 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 MARK2P15-201ENST00000432204 2186 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 Z95327.2-201ENST00000414579 1873 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 AC074029.4-201ENST00000624796 1859 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP2AP11388 RNA5SP51-201ENST00000364750 119 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 MIR195-201ENST00000385194 87 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 VN1R8P-201ENST00000407739 893 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 HIGD1AP4-201ENST00000430194 280 ntBASIC6.89□□□□□ -1.31
TOP2AP11388 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.89□□□□□ -1.31
TOP2AP11388 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.89□□□□□ -1.31
TOP2AP11388 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.89□□□□□ -1.31
TOP2AP11388 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.89□□□□□ -1.31
TOP2AP11388 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP2AP11388 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.89□□□□□ -1.31
TOP2AP11388 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP2AP11388 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.89□□□□□ -1.31
TOP2AP11388 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TOP2AP11388 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms