| GLI3 | P10071 | FCHSD2-205 | ENST00000409853 | 1867 nt | TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL158837.1-201 | ENST00000417644 | 452 nt | TSL 2 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | UBTFL3-201 | ENST00000418934 | 1024 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC138024.1-201 | ENST00000420867 | 699 nt | TSL 3 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL139383.1-203 | ENST00000445227 | 420 nt | TSL 3 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | RPS27AP15-201 | ENST00000447672 | 466 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC078828.1-201 | ENST00000471993 | 458 nt | TSL 3 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | UBTFL6-201 | ENST00000477929 | 1024 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | NPM1P28-201 | ENST00000492269 | 840 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | SETP14-201 | ENST00000497538 | 873 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | DDHD2-219 | ENST00000529845 | 945 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC009292.2-201 | ENST00000558889 | 291 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | EEF1A1P42-201 | ENST00000613436 | 1331 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | GHR-213 | ENST00000622294 | 4312 nt | TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| GLI3 | P10071 | PEX26-201 | ENST00000329627 | 18445 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ZNF705E-201 | ENST00000525199 | 3442 nt | APPRIS P1 TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL672167.1-203 | ENST00000641299 | 2975 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | WDR5B-201 | ENST00000330689 | 3720 nt | APPRIS P1 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | PTPRD-213 | ENST00000537002 | 8224 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | SLC26A3-201 | ENST00000340010 | 2863 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | U1.1-201 | ENST00000384101 | 164 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL117381.1-201 | ENST00000412972 | 374 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL358472.1-201 | ENST00000431295 | 329 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ST7-AS2-203 | ENST00000434993 | 918 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | LINC02000-201 | ENST00000483245 | 640 nt | TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | LINC02466-202 | ENST00000509105 | 653 nt | TSL 3 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC140847.1-201 | ENST00000538025 | 534 nt | TSL 4 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | TTN-AS1-228 | ENST00000589234 | 751 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | MIR4458HG-202 | ENST00000605918 | 1057 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL513477.2-201 | ENST00000607858 | 568 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC022106.2-201 | ENST00000620114 | 757 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | DGKB-202 | ENST00000402815 | 5595 nt | APPRIS ALT1 TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | PRRC1-202 | ENST00000442138 | 5504 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | MKI67-201 | ENST00000368653 | 11417 nt | APPRIS ALT2 TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| GLI3 | P10071 | CDKL5-205 | ENST00000623535 | 12533 nt | APPRIS P1 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC097634.1-201 | ENST00000604491 | 2467 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | PSMD1-213 | ENST00000619128 | 3161 nt | APPRIS ALT1 TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | NXT2-201 | ENST00000218004 | 2692 nt | TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | MFSD8-201 | ENST00000296468 | 4516 nt | APPRIS P1 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ATRX-202 | ENST00000395603 | 10218 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | MIR1289-1-201 | ENST00000408836 | 144 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL158156.1-201 | ENST00000422509 | 473 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | BNIP3P41-201 | ENST00000503774 | 571 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC138938.1-201 | ENST00000515431 | 782 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ZNF682-204 | ENST00000593468 | 581 nt | TSL 4 BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC079880.2-201 | ENST00000603790 | 1213 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC115621.1-201 | ENST00000604653 | 858 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC011816.2-201 | ENST00000607089 | 556 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC140113.4-201 | ENST00000622087 | 222 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ANK2-201 | ENST00000264366 | 11775 nt | APPRIS ALT2 TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | DTNA-208 | ENST00000554864 | 1680 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | GABRG2-221 | ENST00000639683 | 3600 nt | TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL354733.2-209 | ENST00000589233 | 1434 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| GLI3 | P10071 | COX7B2-201 | ENST00000355591 | 542 nt | APPRIS P2 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | TRPM3-206 | ENST00000377097 | 554 nt | TSL 2 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | MIR1179-201 | ENST00000408703 | 91 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL591363.1-201 | ENST00000450091 | 483 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC132825.2-201 | ENST00000483901 | 504 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC139718.2-201 | ENST00000506068 | 481 nt | TSL 3 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC078962.4-201 | ENST00000546135 | 254 nt | TSL 3 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC011824.3-201 | ENST00000585093 | 563 nt | TSL 4 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AC244505.7-201 | ENST00000599675 | 272 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AP001172.1-201 | ENST00000602921 | 581 nt | TSL 3 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | LINC02086-205 | ENST00000628749 | 679 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | OR6C71P-202 | ENST00000641886 | 1107 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | THRB-203 | ENST00000396671 | 7506 nt | APPRIS P2 TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ACSM3-201 | ENST00000289416 | 2845 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | ZNF266-207 | ENST00000592904 | 4401 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | RBM5-214 | ENST00000469838 | 2716 nt | TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AL606516.1-201 | ENST00000455438 | 1861 nt | TSL 2 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AP004289.2-201 | ENST00000444413 | 1457 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | TRPM6-202 | ENST00000360774 | 8425 nt | TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | CALN1-203 | ENST00000395276 | 9189 nt | APPRIS P3 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | AFF2-201 | ENST00000286437 | 12280 nt | TSL 2 BASIC | 5.34 | □□□□□ -1.55 | | |
| GLI3 | P10071 | PUS7L-207 | ENST00000551923 | 3313 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.56 | | |
| GLI3 | P10071 | KCNJ13-201 | ENST00000233826 | 2950 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.56 | | |
| GLI3 | P10071 | CALN1-204 | ENST00000405452 | 8571 nt | TSL 2 BASIC | 5.34 | □□□□□ -1.56 | | |
| GLI3 | P10071 | TBC1D31-210 | ENST00000521676 | 3256 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.56 | | |
| GLI3 | P10071 | IL1RAP-205 | ENST00000412504 | 4875 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.56 | | |
| GLI3 | P10071 | PCNX4-201 | ENST00000317623 | 17339 nt | APPRIS P3 TSL 5 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AL359643.1-201 | ENST00000404109 | 423 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | RPS7P15-201 | ENST00000415804 | 584 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AL583785.1-201 | ENST00000428006 | 512 nt | TSL 2 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | ISM1-AS1-201 | ENST00000431407 | 652 nt | TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC092691.2-201 | ENST00000461787 | 803 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC090602.1-201 | ENST00000469695 | 252 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | SLC9A9-AS1-201 | ENST00000479030 | 518 nt | TSL 5 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | RPS3AP6-201 | ENST00000484430 | 795 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | UBE2D3-217 | ENST00000504211 | 578 nt | TSL 2 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC011396.1-201 | ENST00000507391 | 312 nt | TSL 3 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | NDUFA5P2-201 | ENST00000519723 | 344 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC073530.1-201 | ENST00000535917 | 775 nt | TSL 5 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC007458.1-201 | ENST00000542812 | 373 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | AC027287.2-201 | ENST00000547559 | 592 nt | TSL 4 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | WDR7-OT1-201 | ENST00000592032 | 565 nt | TSL 4 BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | MESTIT1_2.1-201 | ENST00000616328 | 235 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| GLI3 | P10071 | NAMPTP1-201 | ENST00000440465 | 2514 nt | BASIC | 5.33 | □□□□□ -1.56 | | |