Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL773545.4-201ENST00000637262 310 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 OR5BE1P-202ENST00000641168 1176 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AL513478.4-201ENST00000641636 310 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 SNORA60-201ENST00000362396 134 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 RNA5SP443-201ENST00000363083 132 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 ENSAP1-201ENST00000392855 326 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 COX6CP17-201ENST00000421389 185 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 MTCO1P54-201ENST00000430139 712 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 RPS6P2-201ENST00000454208 705 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC084759.1-201ENST00000561168 290 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC022968.1-201ENST00000567372 442 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AP001005.3-201ENST00000622049 129 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 MIR492-201ENST00000638676 116 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC016588.2-201ENST00000632484 3021 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AL929601.4-201ENST00000613011 1341 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC027290.2-201ENST00000623210 18662 ntBASIC4.11□□□□□ -1.75
HLA-DQB2P05538 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQB2P05538 AC027228.2-201ENST00000567141 2154 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 SNORA70C-201ENST00000384538 135 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 RPS26P8-201ENST00000393490 348 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AL022722.2-201ENST00000402519 180 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AL121834.1-202ENST00000404494 277 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 EIF4A1P3-201ENST00000411521 244 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AL356095.1-201ENST00000417217 199 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC115285.1-201ENST00000424879 736 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 RPS11P1-201ENST00000451072 473 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 RPL31P61-201ENST00000496160 376 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 RPS27AP18-201ENST00000515536 459 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC110743.1-201ENST00000584870 478 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 MIR6867-201ENST00000610636 67 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 MIR6868-201ENST00000611215 58 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC097504.1-201ENST00000515103 2415 ntBASIC4.1□□□□□ -1.75
HLA-DQB2P05538 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQB2P05538 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 SNORD74.4-201ENST00000364129 80 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RNA5SP317-201ENST00000410176 116 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RNA5SP311-201ENST00000411290 116 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC013268.2-201ENST00000420753 337 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 UBE2V2P4-201ENST00000447495 259 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 TPT1P12-201ENST00000448968 492 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC092691.2-201ENST00000461787 803 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 PPIAP21-201ENST00000464473 501 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 OR9N1P-201ENST00000491296 333 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AL132838.2-201ENST00000492041 314 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RNA5SP315-201ENST00000516340 116 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RNA5SP312-201ENST00000517068 116 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 NPM1P6-201ENST00000521088 871 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms