Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL035696.2-201ENST00000407941 709 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 SNORA11B-201ENST00000408175 129 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RAC1P3-201ENST00000416129 580 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC092570.3-201ENST00000420113 693 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC093084.1-201ENST00000424233 687 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RPL23AP1-201ENST00000428990 471 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 FTH1P16-201ENST00000435241 552 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL138878.2-201ENST00000440581 1241 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL157884.3-201ENST00000448273 1184 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RNU6-775P-201ENST00000459318 96 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RN7SL738P-201ENST00000470264 297 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RPS29P22-201ENST00000472363 168 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AK3P4-201ENST00000504283 583 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 IGLVIV-65-201ENST00000517313 360 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC109635.6-201ENST00000525487 1113 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC020915.5-201ENST00000596836 964 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RPL12P25-202ENST00000598100 674 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC008782.1-201ENST00000603386 430 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC105105.5-201ENST00000622635 1294 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 FP325313.1-201ENST00000638228 703 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RLIMP2-201ENST00000427891 1563 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MTCO1P8-201ENST00000416914 1523 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AL592148.3-201ENST00000608771 2646 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MT-TP-201ENST00000387461 68 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 RPS3AP23-201ENST00000401762 784 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AL391219.1-201ENST00000422570 483 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 NDUFA5P1-201ENST00000433858 341 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 TXNP2-201ENST00000443918 295 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC002553.2-201ENST00000453217 340 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 RPS23P1-201ENST00000491662 432 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 ATP1B1P1-201ENST00000509767 915 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC117525.1-201ENST00000515228 503 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC067904.2-201ENST00000517322 1283 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC104997.1-201ENST00000519761 717 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MIR4330-201ENST00000579077 105 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC064801.1-201ENST00000612025 407 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MIR6891-201ENST00000618788 93 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AP000346.3-201ENST00000622821 210 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AC025031.4-201ENST00000621248 3271 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 AL137100.1-201ENST00000556703 1620 ntBASIC3.8□□□□□ -1.8
HLA-DPB1P04440 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPB1P04440 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms