Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
USH2AO75445 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 RNU4-82P-201ENST00000362443 140 ntBASIC1.78□□□□□ -2.12
USH2AO75445 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 AL358472.1-201ENST00000431295 329 ntBASIC1.78□□□□□ -2.12
USH2AO75445 RPL26P28-201ENST00000451325 435 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 PSAT1P4-201ENST00000466500 526 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 snoU109.6-201ENST00000516831 118 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC124068.1-201ENST00000563131 678 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AL683813.2-201ENST00000605245 502 ntBASIC1.78□□□□□ -2.12
USH2AO75445 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 ATP5JP1-201ENST00000431631 322 ntBASIC1.78□□□□□ -2.13
USH2AO75445 VN1R48P-201ENST00000448149 1036 ntBASIC1.78□□□□□ -2.13
USH2AO75445 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
USH2AO75445 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
USH2AO75445 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.78□□□□□ -2.13
USH2AO75445 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC1.78□□□□□ -2.13
USH2AO75445 YPEL5P3-201ENST00000547227 352 ntBASIC1.78□□□□□ -2.13
USH2AO75445 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC1.78□□□□□ -2.13
USH2AO75445 NCAPGP2-201ENST00000557911 754 ntBASIC1.78□□□□□ -2.13
USH2AO75445 AL360157.1-201ENST00000565962 87 ntBASIC1.78□□□□□ -2.13
USH2AO75445 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC1.78□□□□□ -2.13
USH2AO75445 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC1.78□□□□□ -2.13
USH2AO75445 AC015914.2-201ENST00000618167 288 ntBASIC1.78□□□□□ -2.13
USH2AO75445 AL355488.2-201ENST00000609909 2850 ntBASIC1.78□□□□□ -2.13
USH2AO75445 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.13
USH2AO75445 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
USH2AO75445 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.13
USH2AO75445 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 SACS-202ENST00000402364 15134 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 AC091862.1-201ENST00000438016 1100 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AL603825.1-201ENST00000438481 80 ntBASIC1.77□□□□□ -2.13
USH2AO75445 RPL5P12-201ENST00000477071 851 ntBASIC1.77□□□□□ -2.13
USH2AO75445 RPL21P13-201ENST00000488305 481 ntBASIC1.77□□□□□ -2.13
USH2AO75445 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 AC093755.1-201ENST00000512950 1023 ntBASIC1.77□□□□□ -2.13
USH2AO75445 PRPF19P1-201ENST00000584766 898 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC1.77□□□□□ -2.13
USH2AO75445 AL606834.2-201ENST00000602954 668 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC064801.1-201ENST00000612025 407 ntBASIC1.77□□□□□ -2.13
USH2AO75445 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 AC093849.1-201ENST00000563631 2209 ntBASIC1.77□□□□□ -2.13
USH2AO75445 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 BX323014.1-201ENST00000412876 237 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC1.77□□□□□ -2.13
USH2AO75445 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 BTF3P5-201ENST00000457252 467 ntBASIC1.77□□□□□ -2.13
USH2AO75445 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 RN7SKP31-201ENST00000516354 278 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC1.77□□□□□ -2.13
USH2AO75445 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 MIR8069-1-201ENST00000616627 86 ntBASIC1.77□□□□□ -2.13
USH2AO75445 MIR8069-2-201ENST00000621412 86 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC243312.2-201ENST00000623340 601 ntBASIC1.77□□□□□ -2.13
USH2AO75445 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
USH2AO75445 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
USH2AO75445 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 NXPH1-205ENST00000602349 1953 ntBASIC1.77□□□□□ -2.13
USH2AO75445 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 AC100778.3-201ENST00000580060 1750 ntBASIC1.77□□□□□ -2.13
USH2AO75445 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms