Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC097262.1-201ENST00000452559 548 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 RPS27AP8-201ENST00000452665 445 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 RPSAP50-201ENST00000481955 852 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC024558.1-201ENST00000505008 528 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 IMPA1P1-201ENST00000510718 842 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC008837.2-201ENST00000513076 418 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 RN7SKP66-201ENST00000516681 231 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC005951.1-201ENST00000576706 485 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC090616.2-202ENST00000584248 222 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 VN1R90P-201ENST00000595717 726 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC006363.1-201ENST00000603806 463 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC096553.1-201ENST00000605169 829 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC072039.2-201ENST00000608883 439 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 MIR7973-1-201ENST00000614683 76 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC022509.4-201ENST00000621404 572 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 AC098679.4-201ENST00000624241 654 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
VPS4BO75351 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC015813.6-201ENST00000624409 5808 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VPS4BO75351 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS4BO75351 TRIM51GP-201ENST00000534741 1350 ntBASIC5.28□□□□□ -1.56
VPS4BO75351 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
VPS4BO75351 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS4BO75351 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 ELL2P3-201ENST00000457883 1602 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS4BO75351 RN7SKP6-201ENST00000364795 319 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RNU6-304P-201ENST00000364855 107 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 RPL21P67-201ENST00000402896 478 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC002524.1-201ENST00000411687 547 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 RPL35AP24-201ENST00000413846 330 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 HSFY4P-201ENST00000415994 1181 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 PAICSP7-201ENST00000419829 962 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 GAPDHP49-201ENST00000421421 961 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 AL009174.1-201ENST00000426577 416 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RLIMP2-201ENST00000427891 1563 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 UBE2D3P4-201ENST00000441973 436 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 MTCYBP3-201ENST00000445588 1137 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 PRPF38AP1-201ENST00000451976 933 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RPL21P134-201ENST00000453468 483 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 BX248409.1-201ENST00000455497 255 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RNU7-125P-201ENST00000458760 62 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 MTND3P7-201ENST00000474435 343 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RPL7AP6-201ENST00000477943 801 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC008953.1-201ENST00000497334 318 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 RNA5SP228-201ENST00000516232 133 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 MRPS16P1-201ENST00000523462 412 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 ELOCP32-201ENST00000548625 324 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS4BO75351 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 NIFKP8-201ENST00000560500 874 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms