Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 AL121890.3-201ENST00000618494 516 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC087385.3-201ENST00000620477 187 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC022079.1-201ENST00000621546 602 ntBASIC4.82□□□□□ -1.64
LDB2O43679 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 AC090897.3-201ENST00000636973 1157 ntBASIC4.82□□□□□ -1.64
LDB2O43679 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.82□□□□□ -1.64
LDB2O43679 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 SOCS5P3-201ENST00000425115 1576 ntBASIC4.82□□□□□ -1.64
LDB2O43679 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
LDB2O43679 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
LDB2O43679 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 AL133268.1-201ENST00000405676 1401 ntBASIC4.81□□□□□ -1.64
LDB2O43679 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 AC107021.2-201ENST00000567714 2095 ntBASIC4.81□□□□□ -1.64
LDB2O43679 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.81□□□□□ -1.64
LDB2O43679 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDB2O43679 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDB2O43679 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU4-68P-201ENST00000364314 141 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-1263P-201ENST00000384601 106 ntBASIC4.81□□□□□ -1.64
LDB2O43679 MIR142-201ENST00000384835 87 ntBASIC4.81□□□□□ -1.64
LDB2O43679 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-1320P-201ENST00000390838 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-1269P-201ENST00000391139 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RN7SKP216-201ENST00000411050 312 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RPS24P7-201ENST00000416921 246 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.81□□□□□ -1.64
LDB2O43679 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 RPL7P34-201ENST00000433316 712 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AL049745.1-201ENST00000433953 286 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 PTGES3P1-201ENST00000439531 483 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RPL31P44-201ENST00000447680 377 ntBASIC4.81□□□□□ -1.64
LDB2O43679 OR51B8P-201ENST00000449892 769 ntBASIC4.81□□□□□ -1.64
LDB2O43679 OR52J1P-201ENST00000450596 932 ntBASIC4.81□□□□□ -1.64
LDB2O43679 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 PTGES3P5-201ENST00000455109 434 ntBASIC4.81□□□□□ -1.64
LDB2O43679 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-599P-201ENST00000459383 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-1193P-201ENST00000459461 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC008837.1-201ENST00000511513 412 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.81□□□□□ -1.64
LDB2O43679 AC109635.6-201ENST00000525487 1113 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 AC023824.3-201ENST00000569003 562 ntBASIC4.81□□□□□ -1.64
LDB2O43679 MIR5699-201ENST00000578903 90 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 RN7SL435P-201ENST00000584418 282 ntBASIC4.81□□□□□ -1.64
LDB2O43679 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.81□□□□□ -1.64
LDB2O43679 AC073569.3-201ENST00000619055 682 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC123767.1-202ENST00000620407 817 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-368P-201ENST00000620928 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 RNU6-538P-201ENST00000622329 107 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC015804.1-201ENST00000622935 435 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AP003485.2-201ENST00000623636 610 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC138907.10-201ENST00000623708 983 ntBASIC4.81□□□□□ -1.64
LDB2O43679 AC004777.1-201ENST00000624317 287 ntBASIC4.81□□□□□ -1.64
LDB2O43679 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LDB2O43679 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.81□□□□□ -1.64
LDB2O43679 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDB2O43679 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDB2O43679 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LDB2O43679 MTND4P8-201ENST00000514997 1362 ntBASIC4.8□□□□□ -1.64
LDB2O43679 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 RNU4-40P-201ENST00000364351 143 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms