Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.55□□□□□ -1.68
TO15178 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 CBX1P4-201ENST00000439415 457 ntBASIC4.55□□□□□ -1.68
TO15178 AC000041.1-201ENST00000439655 175 ntBASIC4.55□□□□□ -1.68
TO15178 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 AL935212.3-201ENST00000450729 284 ntBASIC4.55□□□□□ -1.68
TO15178 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 HMGB3P21-201ENST00000452483 547 ntBASIC4.55□□□□□ -1.68
TO15178 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 AL356981.1-201ENST00000454879 684 ntBASIC4.55□□□□□ -1.68
TO15178 AC093166.2-201ENST00000455969 1017 ntBASIC4.55□□□□□ -1.68
TO15178 snoU109.3-201ENST00000459477 145 ntBASIC4.55□□□□□ -1.68
TO15178 PRELID3BP6-201ENST00000503839 571 ntBASIC4.55□□□□□ -1.68
TO15178 AC026414.1-201ENST00000504046 698 ntBASIC4.55□□□□□ -1.68
TO15178 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 GAPDHP56-201ENST00000506031 988 ntBASIC4.55□□□□□ -1.68
TO15178 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 AC104108.1-201ENST00000509930 412 ntBASIC4.55□□□□□ -1.68
TO15178 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 SNORD116-26-201ENST00000516006 96 ntBASIC4.55□□□□□ -1.68
TO15178 AC027308.1-201ENST00000517993 110 ntBASIC4.55□□□□□ -1.68
TO15178 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 AC083923.1-201ENST00000523708 376 ntBASIC4.55□□□□□ -1.68
TO15178 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.55□□□□□ -1.68
TO15178 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.55□□□□□ -1.68
TO15178 AC026790.2-201ENST00000606282 430 ntBASIC4.55□□□□□ -1.68
TO15178 AL121652.1-201ENST00000608851 448 ntBASIC4.55□□□□□ -1.68
TO15178 AL121890.3-201ENST00000618494 516 ntBASIC4.55□□□□□ -1.68
TO15178 AC019206.1-201ENST00000621938 425 ntBASIC4.55□□□□□ -1.68
TO15178 AC015871.5-202ENST00000623252 701 ntBASIC4.55□□□□□ -1.68
TO15178 AP003485.1-201ENST00000625093 753 ntBASIC4.55□□□□□ -1.68
TO15178 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.55□□□□□ -1.68
TO15178 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.55□□□□□ -1.68
TO15178 U6.107-201ENST00000637108 79 ntBASIC4.55□□□□□ -1.68
TO15178 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TO15178 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
TO15178 RNF6P1-201ENST00000444889 1784 ntBASIC4.55□□□□□ -1.68
TO15178 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TO15178 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TO15178 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TO15178 AL022393.1-201ENST00000625142 1677 ntBASIC4.54□□□□□ -1.68
TO15178 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.54□□□□□ -1.68
TO15178 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TO15178 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
TO15178 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TO15178 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TO15178 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TO15178 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
TO15178 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.54□□□□□ -1.68
TO15178 RNU6-298P-201ENST00000390888 96 ntBASIC4.54□□□□□ -1.68
TO15178 RN7SKP199-201ENST00000410325 305 ntBASIC4.54□□□□□ -1.68
TO15178 RNA5SP345-201ENST00000410646 108 ntBASIC4.54□□□□□ -1.68
TO15178 GTF2IP5-201ENST00000414608 731 ntBASIC4.54□□□□□ -1.68
TO15178 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 ELOCP6-201ENST00000429066 328 ntBASIC4.54□□□□□ -1.68
TO15178 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.54□□□□□ -1.68
TO15178 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.54□□□□□ -1.68
TO15178 AC093414.1-201ENST00000434712 514 ntBASIC4.54□□□□□ -1.68
TO15178 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 AL031663.1-201ENST00000437445 219 ntBASIC4.54□□□□□ -1.68
TO15178 PRPF38AP2-201ENST00000438179 851 ntBASIC4.54□□□□□ -1.68
TO15178 AC073052.1-201ENST00000440417 714 ntBASIC4.54□□□□□ -1.68
TO15178 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 AC073587.1-201ENST00000447093 876 ntBASIC4.54□□□□□ -1.68
TO15178 BTF3P6-201ENST00000448054 499 ntBASIC4.54□□□□□ -1.68
TO15178 AC000111.2-201ENST00000448200 210 ntBASIC4.54□□□□□ -1.68
TO15178 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.54□□□□□ -1.68
TO15178 ELOCP12-201ENST00000458706 328 ntBASIC4.54□□□□□ -1.68
TO15178 AC006511.1-201ENST00000470614 315 ntBASIC4.54□□□□□ -1.68
TO15178 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.54□□□□□ -1.68
TO15178 AC008565.1-201ENST00000509046 885 ntBASIC4.54□□□□□ -1.68
TO15178 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.54□□□□□ -1.68
TO15178 NDUFB4P12-201ENST00000513465 390 ntBASIC4.54□□□□□ -1.68
TO15178 AC110775.1-201ENST00000513721 462 ntBASIC4.54□□□□□ -1.68
TO15178 RNU6-415P-201ENST00000516252 97 ntBASIC4.54□□□□□ -1.68
TO15178 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.54□□□□□ -1.68
TO15178 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.54□□□□□ -1.68
TO15178 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.54□□□□□ -1.68
TO15178 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TO15178 DYNLL1P4-201ENST00000549314 266 ntBASIC4.54□□□□□ -1.68
TO15178 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.54□□□□□ -1.68
TO15178 AL121594.4-201ENST00000556211 1196 ntBASIC4.54□□□□□ -1.68
TO15178 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms