Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
FOXN3O00409 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 SNORA77-201ENST00000408716 125 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC007738.1-201ENST00000413892 348 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 RPL22P18-201ENST00000417197 377 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 RPF2P1-201ENST00000424137 906 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXN3O00409 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 RPL35AP21-201ENST00000437667 333 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 ELOCP10-201ENST00000440624 327 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 BTF3P6-201ENST00000448054 499 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC104306.1-201ENST00000449702 371 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 RPL37P3-201ENST00000456825 293 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 RN7SL172P-201ENST00000460535 303 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC006511.1-201ENST00000470614 315 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXN3O00409 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 UBA52P3-201ENST00000491303 382 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC073073.1-201ENST00000493920 463 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC118282.2-201ENST00000508739 374 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC113347.3-201ENST00000509113 148 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC012339.2-201ENST00000523996 453 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXN3O00409 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXN3O00409 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 BPTFP1-201ENST00000579209 492 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 MIR1269B-201ENST00000580405 75 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC011840.5-201ENST00000582125 771 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXN3O00409 VN1R78P-201ENST00000597393 564 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC091057.2-201ENST00000602594 792 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 ELOCP34-201ENST00000604436 327 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AL008729.2-201ENST00000606393 473 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AL355816.1-201ENST00000607951 118 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 MIR6768-201ENST00000610734 72 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 AC092106.3-201ENST00000611308 722 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 MIR6729-201ENST00000618194 65 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 CR392039.4-201ENST00000624968 501 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 AC090971.4-201ENST00000560291 1800 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
FOXN3O00409 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXN3O00409 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXN3O00409 RNU6-413P-201ENST00000384115 107 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 RNU6-171P-201ENST00000384354 107 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 MTCO2P31-201ENST00000402702 684 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 EIF4A1P3-201ENST00000411521 244 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 NPM1P24-201ENST00000428039 894 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AL353597.2-202ENST00000434901 373 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC084290.1-201ENST00000434995 374 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 KNOP1P3-201ENST00000446933 426 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC004022.1-201ENST00000447766 1066 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 FAR2P1-206ENST00000449736 709 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 PPIAP20-201ENST00000449839 135 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AL691482.1-201ENST00000453255 87 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AL356981.1-201ENST00000454879 684 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 RPS17P2-201ENST00000461663 408 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC097484.1-201ENST00000471148 389 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC079841.1-201ENST00000481228 950 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 SNRPCP2-201ENST00000504370 475 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC010350.1-201ENST00000504908 231 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC092593.2-201ENST00000513866 913 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC116553.2-201ENST00000564203 463 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXN3O00409 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXN3O00409 PCNAP1-202ENST00000595299 752 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 NIFKP6-201ENST00000598115 845 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC105254.2-201ENST00000603636 436 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 AC107952.2-201ENST00000606048 486 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms