Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC009229.4-201ENST00000623854 1947 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC092079.1-201ENST00000558620 1985 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC007529.1-201ENST00000418574 2178 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 AC010300.1-201ENST00000600671 5134 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM1O00151 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM1O00151 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM1O00151 RNU1-87P-201ENST00000363727 170 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 RNA5SP151-201ENST00000365632 117 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 RNU6-40P-201ENST00000384254 107 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AL590762.4-201ENST00000425885 253 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AL158073.1-201ENST00000426848 1104 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 FAR1P1-201ENST00000427163 934 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 NDUFA5P10-201ENST00000432147 357 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 BMS1P19-201ENST00000433925 393 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 AF228730.2-201ENST00000438784 848 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 MTND5P8-201ENST00000449817 1083 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM1O00151 RN7SL319P-201ENST00000480656 221 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AC116562.1-201ENST00000485355 781 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 NIPA2P2-201ENST00000496376 1083 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM1O00151 MTCO1P31-201ENST00000506355 492 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 KCTD9P2-201ENST00000512203 1013 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AP001922.4-201ENST00000526967 290 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 GCSHP4-201ENST00000538792 439 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM1O00151 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM1O00151 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM1O00151 AC135803.1-201ENST00000608748 565 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AP001521.2-201ENST00000608772 546 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 AC116447.1-201ENST00000613153 453 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 RPL23AP61-201ENST00000623642 466 ntBASIC4.37□□□□□ -1.71
PDLIM1O00151 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDLIM1O00151 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PDLIM1O00151 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
PDLIM1O00151 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM1O00151 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AL451142.2-201ENST00000429076 2090 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 RNU6-31P-201ENST00000384388 108 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 MIR550A3-201ENST00000390735 95 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AL133270.1-201ENST00000402635 279 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.36□□□□□ -1.71
PDLIM1O00151 RNA5SP306-201ENST00000411087 107 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AL159169.1-201ENST00000421119 127 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 RPS26P40-201ENST00000435209 294 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 RPL12P46-201ENST00000436610 195 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 RPS15AP29-201ENST00000445539 400 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 RPS27AP15-201ENST00000447672 466 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 RPL31P44-201ENST00000447680 377 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 RPL7P16-201ENST00000479738 738 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 GAPDHP56-201ENST00000506031 988 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM1O00151 COL6A4P2-205ENST00000509855 506 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM1O00151 FTH1P9-201ENST00000513251 355 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 SNORA70.14-201ENST00000516205 110 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AC021006.3-201ENST00000530771 192 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
PDLIM1O00151 AL355802.4-201ENST00000607635 548 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 CR589904.2-201ENST00000612533 440 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AL356490.1-201ENST00000623079 479 ntBASIC4.36□□□□□ -1.71
PDLIM1O00151 AL353662.3-201ENST00000625131 237 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms