Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC041039.1-201ENST00000485656 536 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC090543.1-201ENST00000492168 485 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC021087.2-201ENST00000504656 1203 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC108475.1-201ENST00000507880 950 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC093770.1-201ENST00000511559 571 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 SETP12-201ENST00000514068 805 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC022882.1-201ENST00000532142 501 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 TRAV8-5-201ENST00000537369 341 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 RN7SL176P-201ENST00000580352 264 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 RNF138P2-201ENST00000603490 592 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 OR4H6P-202ENST00000603819 340 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AP004372.1-201ENST00000604842 844 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR8069-1-201ENST00000616627 86 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC234782.5-201ENST00000617723 324 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR8069-2-201ENST00000621412 86 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR3653-201ENST00000625572 110 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC005261.4-201ENST00000600047 1385 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AL606537.1-201ENST00000607258 2011 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL158163.1-201ENST00000603915 1649 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL121657.1-201ENST00000327215 531 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 SNORD51.1-201ENST00000365405 77 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 MT-TP-201ENST00000387461 68 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-1320P-201ENST00000390838 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-1269P-201ENST00000391139 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL034403.1-201ENST00000399414 885 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 MIR1193-201ENST00000408109 78 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 SNORA11F-201ENST00000408237 128 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 NRBF2P2-201ENST00000413087 861 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL23AP38-201ENST00000423801 469 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 GTF2IP2-201ENST00000424290 697 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL21P91-201ENST00000429231 479 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS27AP12-201ENST00000429552 465 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL23AP25-201ENST00000430973 463 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL590762.3-201ENST00000436372 640 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 UBE2V1P3-201ENST00000439651 417 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 HMGB3P9-201ENST00000441799 583 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 MTND2P25-201ENST00000449028 610 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC069277.2-201ENST00000454211 432 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL7AP52-201ENST00000458096 790 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-599P-201ENST00000459383 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-1193P-201ENST00000459461 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS27AP18-201ENST00000515536 459 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RN7SKP21-201ENST00000516503 220 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL020997.2-201ENST00000602607 184 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 MTCO2P22-201ENST00000603246 681 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 SNORD91B-202ENST00000608459 222 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC004241.3-201ENST00000611728 517 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 CR589904.2-201ENST00000612533 440 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-368P-201ENST00000620928 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-538P-201ENST00000622329 107 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC091905.2-201ENST00000623143 306 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AC017002.4-201ENST00000604721 1525 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AP000756.2-201ENST00000624168 2567 ntBASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 AL592182.3-201ENST00000642132 3304 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms