Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 RNA5SP519-201ENST00000516480 119 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 MTND2P7-201ENST00000521337 640 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC018442.3-201ENST00000523025 183 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC090515.3-201ENST00000560431 315 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC068790.5-201ENST00000602741 355 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 MIR6780A-201ENST00000615089 68 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 OR52B1P-201ENST00000316506 909 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RNU2-50P-201ENST00000410494 143 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RPL6P29-201ENST00000414863 865 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AL391219.1-201ENST00000422570 483 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 HMGB1P32-201ENST00000425971 565 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RSL24D1P8-201ENST00000434442 492 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RPL7L1P1-201ENST00000448259 785 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC073264.2-201ENST00000448886 166 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 MTND2P25-201ENST00000449028 610 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 HSPE1P22-201ENST00000456856 327 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RPL36AP13-201ENST00000457490 317 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC109458.1-201ENST00000508858 316 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 TRAV8-5-201ENST00000537369 341 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RPL23AP87-202ENST00000573039 466 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 RPL12P25-202ENST00000598100 674 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AP000255.1-201ENST00000610276 676 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC090246.1-201ENST00000616499 426 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AP003499.2-201ENST00000624100 483 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 LINC02471-203ENST00000641941 4752 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AL158163.1-201ENST00000603915 1649 ntBASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM49D1C9J1S8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ERCC6-202ENST00000374127 1782 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 OR5T3-201ENST00000303059 1023 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RN7SKP224-201ENST00000364140 325 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RNVU1-6-201ENST00000364688 164 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ZNF603P-201ENST00000405613 487 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 FAR2P2-201ENST00000413041 594 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RPL23AP1-201ENST00000428990 471 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 XKRYP6-201ENST00000440468 1116 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 XKRYP3-201ENST00000442113 1116 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RPL7P32-201ENST00000457119 744 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 TRBV8-1-201ENST00000481590 279 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC069499.1-201ENST00000489433 509 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 HPRT1P2-201ENST00000505250 544 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC093824.1-201ENST00000508796 343 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RNA5SP49-201ENST00000516450 115 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 RNU6-943P-201ENST00000516960 98 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AP001804.2-201ENST00000533932 910 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms