Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC78A2IDD5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RN7SKP160-201ENST00000363804 340 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 snoZ40.1-201ENST00000364540 72 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RNA5SP132-201ENST00000364725 118 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RN7SKP124-201ENST00000364730 341 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 MIR143-201ENST00000385300 106 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 DBIP1-201ENST00000401435 260 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RNA5SP296-201ENST00000410523 111 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC004074.1-201ENST00000421810 1063 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 HMGN2P27-201ENST00000427352 270 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC129850.1-201ENST00000436203 508 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 ELOCP8-201ENST00000439309 332 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL353093.1-201ENST00000441292 436 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 ELOCP15-201ENST00000442090 332 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC105399.1-202ENST00000447303 205 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 TPMTP4-201ENST00000450749 678 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC002553.2-201ENST00000453217 340 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL035090.1-201ENST00000454835 332 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RPL7AP52-201ENST00000458096 790 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC108161.1-201ENST00000461060 402 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 RPL7P48-201ENST00000461513 746 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC073358.1-201ENST00000505671 684 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL359219.2-201ENST00000555184 348 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL390334.1-201ENST00000556395 450 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 NPM1P47-201ENST00000560843 856 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 ACTR3BP3-201ENST00000565577 979 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 MIR3912-201ENST00000577566 105 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 VN1R90P-201ENST00000595717 726 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC072039.2-201ENST00000608883 439 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC006338.2-201ENST00000616864 791 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL157770.1-201ENST00000623049 439 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC091931.1-201ENST00000623488 728 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 FP325313.1-201ENST00000638228 703 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AL390237.1-201ENST00000404226 1415 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 AC093536.2-201ENST00000565257 1406 ntBASIC5.39□□□□□ -1.55
CCDC78A2IDD5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC78A2IDD5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 RNA5SP241-201ENST00000391326 114 ntBASIC5.38□□□□□ -1.55
CCDC78A2IDD5 RPL35AP24-201ENST00000413846 330 ntBASIC5.38□□□□□ -1.55
CCDC78A2IDD5 AC016769.2-201ENST00000414815 475 ntBASIC5.38□□□□□ -1.55
CCDC78A2IDD5 TCEA1P4-201ENST00000415066 844 ntBASIC5.38□□□□□ -1.55
CCDC78A2IDD5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 AC011233.1-201ENST00000422812 283 ntBASIC5.38□□□□□ -1.55
CCDC78A2IDD5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC78A2IDD5 BRWD1P3-201ENST00000428816 390 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms