Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 OR52B1P-201ENST00000316506 909 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SNORA51.2-201ENST00000364595 132 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RNA5SP355-201ENST00000365317 135 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 UBBP1-201ENST00000392399 473 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 PDCL3P5-201ENST00000398028 722 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 Z97832.1-201ENST00000402490 328 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RPL7P25-201ENST00000404151 721 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RN7SKP137-201ENST00000411074 307 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL354751.2-201ENST00000415471 210 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL138479.1-201ENST00000426913 484 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 USP24P1-201ENST00000433802 779 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 MRPS21P3-201ENST00000436696 262 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC009518.3-201ENST00000438972 253 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 GAPDHP33-201ENST00000443168 1013 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL136380.1-201ENST00000447970 162 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC083798.1-201ENST00000472671 131 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL390198.2-201ENST00000510553 222 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC034159.1-201ENST00000513885 583 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RNU6-202P-201ENST00000515998 96 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 Vault.3-201ENST00000516676 95 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RNU6-201P-201ENST00000517100 61 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SUB1P2-201ENST00000556401 297 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL161729.3-201ENST00000603533 673 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL132765.2-201ENST00000610812 351 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC068726.1-201ENST00000610993 341 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL136097.3-201ENST00000611097 505 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 RMST_3.1-201ENST00000611651 109 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AC078899.5-201ENST00000612475 178 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 CCT4P2-201ENST00000233836 1548 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AP001541.1-201ENST00000623322 1904 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 AP002907.1-201ENST00000606361 1430 ntBASIC5.56□□□□□ -1.52
SHISA3A0PJX4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 CKAP2P1-201ENST00000555477 2049 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 ERCC6-202ENST00000374127 1782 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC006210.2-201ENST00000367074 1545 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 USP9YP4-201ENST00000424401 1745 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 Y_RNA.159-201ENST00000363674 87 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RNU6-282P-201ENST00000365357 103 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC074375.1-201ENST00000372993 192 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RNU6-444P-201ENST00000383988 108 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms