Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC108463.1-201ENST00000450258 347 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RPL23AP23-201ENST00000452590 471 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 CALM1P2-201ENST00000452941 448 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC090142.1-201ENST00000465776 462 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RN7SL738P-201ENST00000470264 297 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 CYCSP20-201ENST00000473154 315 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 SETP6-201ENST00000479329 568 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 PRELID3BP6-201ENST00000503839 571 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 UBE2V1P12-201ENST00000503954 474 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC096571.1-202ENST00000506634 735 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC105129.1-201ENST00000560250 297 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RN7SL339P-201ENST00000580597 296 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AP005229.2-201ENST00000609980 697 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AL450326.2-201ENST00000421913 1962 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 RNU6-252P-201ENST00000363232 107 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 MT-TP-201ENST00000387461 68 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 TAF9BP2-201ENST00000400856 499 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 MTCO2P8-201ENST00000412213 658 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AL158825.1-201ENST00000414735 521 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 CYCSP10-201ENST00000417973 294 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 VN1R42P-201ENST00000424651 344 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 RRM2P4-201ENST00000441721 562 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 FHP1-201ENST00000442741 703 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 CEACAMP9-201ENST00000442990 513 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC011753.3-201ENST00000443436 406 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 RPL36AP41-201ENST00000493820 306 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC025164.1-201ENST00000496249 478 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 HMGB3P16-201ENST00000508037 287 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC138938.1-201ENST00000515431 782 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC107918.3-201ENST00000533272 382 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 BNIP3P38-201ENST00000601117 544 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 BMS1P7-201ENST00000602440 1052 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC005034.4-201ENST00000603612 899 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AL121652.1-201ENST00000608851 448 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AP003476.1-201ENST00000623984 516 ntBASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SNX9Q9Y5X1 CASC19-284ENST00000642142 1868 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 BX005019.1-201ENST00000561881 1810 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL359922.3-201ENST00000624779 1670 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 MIR16-2-201ENST00000362117 81 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 GSTA12P-201ENST00000402398 508 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AP000580.1-201ENST00000404439 358 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 VN1R51P-201ENST00000411675 945 ntBASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX9Q9Y5X1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5□□□□□ -1.61
SNX9Q9Y5X1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms