Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NDUFA5P7-201ENST00000452914 242 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ACA64.4-201ENST00000459070 127 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 RN7SL583P-201ENST00000475692 287 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 PFN1P6-201ENST00000476786 399 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006539.1-201ENST00000481419 501 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 RN7SL809P-201ENST00000482040 297 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC074255.1-201ENST00000511259 501 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU6-1261P-201ENST00000517194 104 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC027309.2-201ENST00000520566 192 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC010200.2-201ENST00000605098 235 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL451064.1-201ENST00000607718 471 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC005962.2-201ENST00000611427 652 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009163.6-201ENST00000612367 342 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC016769.4-201ENST00000616893 535 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MIR6730-201ENST00000622213 67 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC073530.2-201ENST00000623987 261 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 CASC19-264ENST00000641912 1184 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL390862.1-201ENST00000635467 1469 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011933.2-201ENST00000578539 2790 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC090017.1-201ENST00000548612 1779 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU6-553P-201ENST00000364047 96 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SNORA58B-201ENST00000364259 136 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RNA5SP131-201ENST00000365452 119 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SPTLC1P2-201ENST00000407089 121 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL357752.1-201ENST00000412817 349 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 METTL15P3-201ENST00000415522 1221 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 BOLA3P4-201ENST00000418151 400 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 TIMM9P2-201ENST00000419324 266 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC098826.1-201ENST00000433943 471 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 NPM1P18-201ENST00000434232 732 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL591503.2-201ENST00000442314 1005 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009961.3-201ENST00000449832 765 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL12P26-201ENST00000452430 487 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SBDSP1-204ENST00000453858 737 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL7P1-201ENST00000468161 747 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL7P9-201ENST00000468715 747 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 OR2AO1P-201ENST00000476497 403 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 UBA52P3-201ENST00000491303 382 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 MIR1269B-201ENST00000580405 75 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC103881.1-201ENST00000603476 538 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL590229.1-201ENST00000603497 542 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC112220.3-201ENST00000605502 502 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC004223.4-201ENST00000612426 332 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AL139418.1-201ENST00000613613 177 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms