Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 ASNSP1-201ENST00000518311 1939 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 SNORA56-201ENST00000383966 129 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AL049697.2-201ENST00000403708 294 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP199-201ENST00000410325 305 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RPL12P34-201ENST00000424532 479 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AL390879.2-203ENST00000426943 1121 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RPL12P46-201ENST00000436610 195 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 MED6P1-201ENST00000439659 713 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 H2AFZP6-201ENST00000444403 394 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 CEACAMP6-201ENST00000452007 574 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 MTND2P6-201ENST00000455337 1030 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC025768.1-201ENST00000510057 267 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC097505.1-201ENST00000610199 565 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC243654.2-201ENST00000612843 443 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC108751.5-201ENST00000492880 1336 ntBASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4BQ9Y4P1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.34□□□□□ -1.72
ATG4BQ9Y4P1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.34□□□□□ -1.72
ATG4BQ9Y4P1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ATG4BQ9Y4P1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ATG4BQ9Y4P1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ATG4BQ9Y4P1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 SNORA62.2-201ENST00000364672 152 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 SNORA71.2-201ENST00000364941 134 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 MIR92A2-201ENST00000385299 75 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 SNORD96B-201ENST00000386148 79 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 MIR921-201ENST00000401133 56 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC092570.3-201ENST00000420113 693 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 PTP4A1P3-201ENST00000433661 420 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AL353718.1-201ENST00000451028 517 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 PPIAP21-201ENST00000464473 501 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AL133338.2-201ENST00000604292 736 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 KATNBL1P5-201ENST00000605015 517 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 RPL21P136-201ENST00000605378 396 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 AC006213.5-201ENST00000619673 288 ntBASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4BQ9Y4P1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms