Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC027544.3-201ENST00000535082 757 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC073137.1-201ENST00000605636 634 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC000367.1-201ENST00000452711 1766 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC135352.1-201ENST00000506173 1418 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 RNU5F-7P-201ENST00000363696 115 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL109755.1-201ENST00000401791 649 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 JKAMPP1-201ENST00000413804 919 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 MTCYBP8-201ENST00000422855 651 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 DPY19L1P2-201ENST00000426647 915 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 OR2B7P-201ENST00000429302 934 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 CACYBPP1-201ENST00000438592 684 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL392103.1-201ENST00000447000 198 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 RPL30P9-201ENST00000465586 330 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC139783.2-201ENST00000504847 1145 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AL137100.2-201ENST00000555786 315 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC018690.1-201ENST00000608144 626 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC063952.1-203ENST00000634410 658 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 AC007382.1-201ENST00000624376 2618 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDZRN3Q9UPQ7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC011455.2-201ENST00000599320 3336 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 Y_RNA.384-201ENST00000383909 102 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 Y_RNA.445-201ENST00000384168 102 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 U3.43-201ENST00000410734 213 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC211486.3-201ENST00000412694 621 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 USP9YP13-201ENST00000417797 480 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 PNRC2P1-201ENST00000423940 420 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AL365184.2-201ENST00000431139 435 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LYPLA1P1-201ENST00000434514 622 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 HMGB1P29-201ENST00000505659 499 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC114797.1-201ENST00000514003 728 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 RNU7-30P-201ENST00000516835 62 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-1137P-201ENST00000517073 99 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 MRPS21P8-201ENST00000569196 235 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms