Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 VN1R51P-201ENST00000411675 945 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL445183.3-201ENST00000414168 502 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 EIF4A1P1-201ENST00000420241 934 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL160175.1-201ENST00000428124 247 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 FTH1P16-201ENST00000435241 552 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL353898.1-201ENST00000444055 238 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RPL23AP43-201ENST00000446445 471 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC069277.2-201ENST00000454211 432 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL445433.1-201ENST00000457507 257 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RPL7AP10-201ENST00000481016 791 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RN7SL346P-201ENST00000491561 294 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 SUMO2P5-201ENST00000506790 245 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RNA5SP446-201ENST00000515955 82 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC010476.1-201ENST00000519111 851 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AP000827.1-201ENST00000527814 258 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL390334.1-201ENST00000556395 450 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC104229.1-201ENST00000561364 255 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AGGF1P5-201ENST00000567900 919 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 MTATP6P24-201ENST00000576835 677 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 MIR5096-201ENST00000583713 70 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 BNIP3P38-201ENST00000601117 544 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 MTCO2P22-201ENST00000603246 681 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC019193.2-201ENST00000610012 634 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC124016.2-201ENST00000610058 665 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL158062.1-201ENST00000619632 745 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AL356863.1-201ENST00000623378 1080 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC00622-201ENST00000562811 1570 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RPL23AP59-201ENST00000399415 461 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AL355615.1-201ENST00000406187 641 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RN7SKP216-201ENST00000411050 312 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RPL26P37-201ENST00000411983 438 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AL121878.1-201ENST00000418638 859 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 OR51A6P-201ENST00000418680 1004 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RPS26P2-201ENST00000440331 348 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 H2AFZP6-201ENST00000444403 394 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AL031584.1-201ENST00000447169 754 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AL591623.2-201ENST00000449978 222 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 CYCSP42-201ENST00000450823 238 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 snoU13.1-201ENST00000459157 104 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 RPS3AP6-201ENST00000484430 795 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC010374.1-201ENST00000503762 1237 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 Y_RNA.717-201ENST00000517106 92 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC087894.1-201ENST00000538359 518 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC021483.2-201ENST00000567415 758 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC090181.2-201ENST00000602975 672 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC012409.3-201ENST00000611343 981 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AP001005.3-201ENST00000622049 129 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC093875.1-201ENST00000623688 504 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC068787.1-201ENST00000623908 691 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC107021.2-201ENST00000567714 2095 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms