Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC005255.1-201ENST00000593748 216 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC010487.1-201ENST00000594408 1172 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC090246.1-201ENST00000616499 426 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC018816.2-201ENST00000621460 353 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AF001550.2-201ENST00000636643 217 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 HSPD1P11-201ENST00000508643 1702 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 MIR449B-201ENST00000384995 97 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC091286.1-201ENST00000431233 461 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AL157884.3-201ENST00000448273 1184 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 FABP3P2-201ENST00000453169 399 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AL139099.1-201ENST00000497398 403 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 NDUFA5P2-201ENST00000519723 344 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 OR5D2P-201ENST00000524390 911 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC012417.1-201ENST00000582307 1039 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AC015967.1-201ENST00000619893 476 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 CR392039.5-201ENST00000623201 510 ntBASIC5.19□□□□□ -1.58
SCN11AQ9UI33 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SCN11AQ9UI33 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 ZNF285B-201ENST00000561698 1767 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AC007066.1-201ENST00000392902 381 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AC092691.2-201ENST00000461787 803 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 MORF4L2P1-201ENST00000503761 858 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AP000619.3-201ENST00000535634 1127 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 VN1R92P-201ENST00000598511 928 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 AC015726.1-201ENST00000602353 681 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 PCA3_2.1-201ENST00000612507 409 ntBASIC5.18□□□□□ -1.58
SCN11AQ9UI33 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN11AQ9UI33 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AL049781.1-201ENST00000623195 3585 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 OR9M1P-201ENST00000459641 921 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC018635.1-201ENST00000468292 1030 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 RPL7P49-201ENST00000471402 708 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 RN7SL323P-201ENST00000494712 295 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 SNX6P1-201ENST00000601728 1224 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC091167.4-201ENST00000605079 184 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 Z95327.2-201ENST00000414579 1873 ntBASIC5.17□□□□□ -1.58
SCN11AQ9UI33 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN11AQ9UI33 SNORA73.2-201ENST00000364946 201 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC233289.1-201ENST00000403700 508 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 SEPT7P8-201ENST00000413308 775 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 MTCO1P54-201ENST00000430139 712 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 RNU7-143P-201ENST00000516781 65 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms