Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC007618.1-201ENST00000366455 732 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 SUGT1P1-201ENST00000379514 476 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 RNU6-1300P-201ENST00000391046 108 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL645927.1-201ENST00000396783 406 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL078604.1-201ENST00000404609 466 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL133264.1-201ENST00000407157 562 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 EIF4A1P3-201ENST00000411521 244 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 GNG5P5-201ENST00000420444 220 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 RPL7P56-201ENST00000429441 717 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 USP9YP31-201ENST00000431405 881 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 RPL12P17-201ENST00000432393 498 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC105402.2-201ENST00000438503 358 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 EEF1B2P5-201ENST00000444820 548 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL034418.1-201ENST00000448675 860 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 FAR2P1-206ENST00000449736 709 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 USP9YP25-201ENST00000457708 443 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 SNORD125-201ENST00000459538 96 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 RPL5P24-201ENST00000463742 885 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 RN7SL329P-201ENST00000467740 299 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC108734.3-201ENST00000481241 1165 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC009852.2-201ENST00000567898 485 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC005341.1-201ENST00000571086 708 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 AL390838.2-201ENST00000602394 274 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC068313.1-201ENST00000604028 1008 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 AC021755.4-201ENST00000616620 456 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 OR55B1P-203ENST00000641518 2602 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC138907.8-201ENST00000623981 2256 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC025125.1-201ENST00000624743 1922 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 SNORA5.1-201ENST00000384275 131 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 TAS2R15P-201ENST00000390674 928 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 RNU1-149P-201ENST00000390870 161 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 DSTNP4-201ENST00000399472 474 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC119751.3-201ENST00000399720 670 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 FABP12P1-201ENST00000401911 322 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL121978.1-201ENST00000402778 359 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL512430.2-201ENST00000406786 339 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 RN7SKP199-201ENST00000410325 305 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 MRPS36P1-201ENST00000421291 307 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC108075.1-201ENST00000424692 529 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 RPP40P1-201ENST00000426762 456 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 RPL12P3-201ENST00000440080 396 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 MTND1P26-201ENST00000440488 538 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 GAPDHP14-201ENST00000450472 937 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 HMGN3P1-201ENST00000453847 193 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 RN7SL188P-201ENST00000469842 285 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC104971.1-201ENST00000495117 578 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 RPL15P21-201ENST00000495592 567 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 FTH1P11-201ENST00000517577 551 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms