Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 JKAMPP1-201ENST00000413804 919 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 CALM1P2-201ENST00000452941 448 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 RPL7AP52-201ENST00000458096 790 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 RN7SL177P-201ENST00000476596 299 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 RPS26P15-201ENST00000488067 348 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC068714.1-201ENST00000559623 800 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC084783.1-201ENST00000565846 910 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC116447.1-201ENST00000613153 453 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AP005019.3-201ENST00000620418 560 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 MIR7702-201ENST00000621931 59 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC092079.1-201ENST00000558620 1985 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 CASC19-284ENST00000642142 1868 ntBASIC4.01□□□□□ -1.77
VAPAQ9P0L0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4□□□□□ -1.77
VAPAQ9P0L0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VAPAQ9P0L0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VAPAQ9P0L0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VAPAQ9P0L0 OR5P1P-201ENST00000299512 925 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4□□□□□ -1.77
VAPAQ9P0L0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4□□□□□ -1.77
VAPAQ9P0L0 SNORA11F-201ENST00000408237 128 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 OR6K4P-201ENST00000423179 955 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 RPS6P12-201ENST00000432491 726 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 LYPLA1P1-201ENST00000434514 622 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 GSTA7P-201ENST00000438425 448 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 RPL23AP52-201ENST00000439311 478 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 RAD23BP3-201ENST00000454157 1152 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 EIF4A2P2-201ENST00000455776 1070 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4□□□□□ -1.77
VAPAQ9P0L0 RN7SL354P-201ENST00000469282 294 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 METTL15P1-201ENST00000481421 1045 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC105233.1-201ENST00000498840 781 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4□□□□□ -1.77
VAPAQ9P0L0 CCNHP1-201ENST00000513311 678 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 RNU6-347P-201ENST00000516658 105 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 DEFB109D-201ENST00000529497 240 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 AC008147.3-201ENST00000548666 354 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 C1GALT1P1-201ENST00000548895 1089 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC044860.2-201ENST00000561005 179 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC007599.1-201ENST00000568688 1174 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 MIR4436B2-201ENST00000581415 91 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 MIR4436B1-201ENST00000583272 91 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4□□□□□ -1.77
VAPAQ9P0L0 AC010200.2-201ENST00000605098 235 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 AC025175.1-201ENST00000606482 759 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 FAM25E-202ENST00000608562 189 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 AC012409.3-201ENST00000611343 981 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
VAPAQ9P0L0 AC004825.2-201ENST00000616634 455 ntBASIC4□□□□□ -1.77
VAPAQ9P0L0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4□□□□□ -1.77
VAPAQ9P0L0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4□□□□□ -1.77
VAPAQ9P0L0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4□□□□□ -1.77
VAPAQ9P0L0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
VAPAQ9P0L0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VAPAQ9P0L0 AL451142.2-201ENST00000429076 2090 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 MIR1179-201ENST00000408703 91 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 RPEP3-201ENST00000425462 676 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 SERPINA7P1-201ENST00000443077 631 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AC104306.1-201ENST00000449702 371 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 RPL23AP81-201ENST00000455252 467 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.99□□□□□ -1.77
VAPAQ9P0L0 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AC010374.1-201ENST00000503762 1237 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AC108471.1-201ENST00000513977 287 ntBASIC3.99□□□□□ -1.77
VAPAQ9P0L0 AC063950.1-201ENST00000552036 308 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms