Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AC011471.4-201ENST00000638271 216 ntBASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 MIR193BHG-214ENST00000641765 509 ntBASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 MTCO1P14-201ENST00000441695 1559 ntBASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 ASNSP1-204ENST00000641977 1664 ntBASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AC079949.2-201ENST00000617117 2933 ntBASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CUEDC1Q9NWM3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC104118.1-201ENST00000607625 1589 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.47-201ENST00000362697 108 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RNA5SP53-201ENST00000391299 120 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RN7SKP106-201ENST00000410832 272 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RPL36P18-201ENST00000419316 318 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RPS7P14-201ENST00000426405 583 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PPIAP13-201ENST00000434706 478 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL627308.1-201ENST00000435693 821 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL137792.2-201ENST00000443484 235 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL034399.1-201ENST00000451535 380 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 SRP68P2-201ENST00000456184 254 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC005229.2-201ENST00000456995 399 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PPP1R2P5-201ENST00000457256 603 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RN7SL518P-201ENST00000491887 280 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 MTCO1P29-201ENST00000496868 288 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC024558.1-201ENST00000505008 528 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC010587.1-201ENST00000505809 469 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PABPC1P1-201ENST00000506347 591 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC011352.2-201ENST00000514574 1016 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 SMURF2P1-201ENST00000514992 481 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RPS27AP18-201ENST00000515536 459 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-583P-201ENST00000516012 92 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1137P-201ENST00000517073 99 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009902.1-201ENST00000519351 183 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 COX6B1P4-201ENST00000519826 484 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PCNAP4-201ENST00000532690 730 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC244034.2-201ENST00000562504 509 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 MIR544B-201ENST00000582372 78 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC007938.3-201ENST00000604965 623 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC113194.1-201ENST00000606037 500 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-87P-201ENST00000607561 108 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC015819.1-201ENST00000613588 663 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009318.4-201ENST00000620496 486 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC008626.2-201ENST00000624425 248 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009161.2-201ENST00000624626 138 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC009313.2-201ENST00000417893 1941 ntBASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms