Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 ARL4AP1-201ENST00000503220 705 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC105384.2-201ENST00000508433 640 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC114781.3-201ENST00000512083 142 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 RN7SKP96-201ENST00000516948 297 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC112191.2-201ENST00000522428 333 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 ARL2BPP5-201ENST00000523141 481 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC073429.2-201ENST00000569694 1444 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 MIR4489-201ENST00000578869 62 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 VN1R92P-201ENST00000598511 928 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AP001981.2-201ENST00000603241 418 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 ELOCP34-201ENST00000604436 327 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AL031667.3-201ENST00000620124 655 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 PCMTD1P7-201ENST00000634506 357 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 AP004607.3-201ENST00000530354 3915 ntBASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCM2LQ9NUG4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL390237.1-201ENST00000404226 1415 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 OR52B3P-201ENST00000314715 928 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RNA5SP110-201ENST00000362638 115 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RNU6-444P-201ENST00000383988 108 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL138880.1-201ENST00000405824 642 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 NCSTNP1-201ENST00000406229 144 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RPL6P29-201ENST00000414863 865 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 HSFY4P-201ENST00000415994 1181 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 NPM1P11-201ENST00000417106 855 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RBMY2KP-201ENST00000418221 992 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 RPS4XP5-201ENST00000419038 768 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 IFNNP1-201ENST00000429219 553 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL445928.1-201ENST00000435545 222 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 OR52E3P-201ENST00000452083 936 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC011476.1-201ENST00000466725 307 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC072039.1-201ENST00000477611 581 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL136038.1-201ENST00000497246 351 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 KLRA1P-201ENST00000503499 986 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC106038.2-201ENST00000520706 568 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC092121.1-201ENST00000569452 202 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC008687.2-201ENST00000597865 520 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC025165.5-201ENST00000602802 578 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC123786.2-201ENST00000603459 275 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AL139124.1-201ENST00000609123 421 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC245014.3-201ENST00000618589 347 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC092650.2-201ENST00000619984 902 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 AC120349.2-201ENST00000625002 298 ntBASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCM2LQ9NUG4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms