Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AL731532.2-201ENST00000623542 1953 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 SNORA66-201ENST00000384792 133 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 MIR223-201ENST00000385204 110 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 U3.36-201ENST00000408418 213 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RNU6-272P-201ENST00000411028 104 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AP000534.2-201ENST00000412729 568 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 QRSL1P2-201ENST00000418582 964 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 GTF2IP3-201ENST00000433887 494 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 HMGB1P48-201ENST00000446155 598 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AL009048.1-201ENST00000450437 298 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 IGHV5-78-201ENST00000450948 295 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 APOOP2-201ENST00000461561 539 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RN7SL799P-201ENST00000475891 298 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 FTH1P24-201ENST00000503502 462 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 COX6B1P5-201ENST00000509843 249 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC027308.1-201ENST00000517993 110 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 LSM3P2-201ENST00000551246 273 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 NIFKP8-201ENST00000560500 874 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC011477.5-201ENST00000586571 259 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC105254.2-201ENST00000603636 436 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC104687.2-201ENST00000604442 342 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC004232.3-201ENST00000622977 525 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC104985.3-201ENST00000623479 597 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC000374.1-201ENST00000434698 1745 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 SAGE2P-201ENST00000420011 2126 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 SGO1P1-201ENST00000603525 1447 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 THAP12P4-201ENST00000528321 2266 ntBASIC4.79□□□□□ -1.64
BRF2Q9HAW0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF2Q9HAW0 AC111188.2-201ENST00000529697 1387 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ZNF29P-201ENST00000225587 168 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 RNU1-87P-201ENST00000363727 170 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 MIR16-1-201ENST00000385271 89 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 RN7SKP247-201ENST00000411094 308 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 RPS7P9-201ENST00000414704 586 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 TMBIM7P-201ENST00000418074 855 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 GTF2IP2-201ENST00000424290 697 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 MTCYBP32-201ENST00000427945 1084 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC092634.2-201ENST00000428146 1010 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 TCEA1P1-201ENST00000449716 880 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AP000942.1-201ENST00000463969 747 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC079841.1-201ENST00000481228 950 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 UBA52P7-201ENST00000486088 380 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 RN7SL30P-201ENST00000488416 306 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 UBA52P3-201ENST00000491303 382 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC072052.1-201ENST00000496556 306 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 RPL21P131-201ENST00000497298 483 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms