Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL161631.1-201ENST00000417933 486 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MFSD13B-201ENST00000420133 1290 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AL356387.2-201ENST00000422272 243 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC114755.5-201ENST00000447760 831 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MTND6P5-201ENST00000448266 512 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 SAP18P1-201ENST00000512058 390 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC069366.1-201ENST00000583159 838 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC113403.1-201ENST00000604910 193 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MIR432-201ENST00000606207 94 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 AC090017.1-201ENST00000548612 1779 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 CCT8P1-201ENST00000413611 1657 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 RNU6-729P-201ENST00000384399 107 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 RPS26P8-201ENST00000393490 348 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AMZ2P2-201ENST00000406819 1057 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 OR2X1P-201ENST00000421144 687 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 RN7SKP5-201ENST00000517045 272 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 TRAV8-5-201ENST00000537369 341 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 uc_338.13-201ENST00000618243 179 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AC067931.1-201ENST00000624190 671 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 OR8B1P-202ENST00000641132 1178 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 CR382285.2-201ENST00000624662 1495 ntBASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.07□□□□□ -1.6
UPF3BQ9BZI7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 RPL32P23-201ENST00000397237 405 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 PHBP16-201ENST00000446318 950 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 PGBD4P4-201ENST00000509673 613 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC010476.1-201ENST00000519111 851 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC133552.5-201ENST00000604266 540 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC244517.3-201ENST00000616254 1235 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 AC138627.1-204ENST00000641894 765 ntBASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF3BQ9BZI7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AL929601.4-201ENST00000613011 1341 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 RBMY1KP-201ENST00000423480 476 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AL157831.1-201ENST00000426134 473 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 SERPINA7P1-201ENST00000443077 631 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms