Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC110743.1-201ENST00000584870 478 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC092354.2-201ENST00000607786 514 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AP001437.1-201ENST00000608783 456 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC100793.4-201ENST00000613683 429 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AL121873.1-201ENST00000616013 524 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC025048.6-202ENST00000627667 438 ntBASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM55Q9BYV6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 OR4G11P-202ENST00000642116 1414 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 RNU6-462P-201ENST00000362659 105 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 RNU6-501P-201ENST00000364072 100 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 RNU1-85P-201ENST00000364127 164 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 RNY3P10-201ENST00000384764 102 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 DEFB108C-201ENST00000400154 252 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AL139805.1-201ENST00000407837 289 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 SNORA11B-201ENST00000408175 129 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC245096.1-201ENST00000413104 546 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC004448.2-201ENST00000422360 586 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 HNRNPA1P29-201ENST00000426409 879 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 RPL36P19-201ENST00000430744 301 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 GAPDHP23-201ENST00000444823 993 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 USP9YP29-201ENST00000445112 563 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 BMI1P1-201ENST00000445879 941 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 COX6CP12-201ENST00000446748 202 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 EEF1E1P1-201ENST00000446998 430 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 ST13P20-201ENST00000447996 1065 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 RPL39P6-201ENST00000448289 150 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 RPL5P32-201ENST00000454085 879 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC068228.1-201ENST00000461723 211 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC097493.1-201ENST00000463958 372 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC010301.1-201ENST00000473936 355 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 RPL12P30-201ENST00000488389 499 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC109458.1-201ENST00000508858 316 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 CYCSP38-201ENST00000559840 322 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 ZNF415P1-201ENST00000582279 1166 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AP001004.1-201ENST00000582468 324 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC007786.3-201ENST00000615154 596 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM55Q9BYV6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 MAPK6PS2-201ENST00000379571 2060 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 AL445437.1-201ENST00000623157 3087 ntBASIC6□□□□□ -1.45
TRIM55Q9BYV6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM55Q9BYV6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC135352.1-201ENST00000506173 1418 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AL603750.1-201ENST00000624216 1717 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC009229.4-201ENST00000623854 1947 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC109446.4-201ENST00000623235 2755 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 AC117529.2-201ENST00000512159 2068 ntBASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM55Q9BYV6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms