Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ATP5F1P4-201ENST00000397288 746 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 OR5BE1P-201ENST00000425977 939 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 RPL23AP25-201ENST00000430973 463 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 RPS4XP4-201ENST00000443195 763 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 FCF1P7-201ENST00000451185 558 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 SOD1P3-201ENST00000518682 454 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 MIR5684-201ENST00000585074 65 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 MIR6868-201ENST00000611215 58 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AL034408.1-202ENST00000636088 415 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 OR5BE1P-202ENST00000641168 1176 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 MIR30B-201ENST00000384850 88 ntBASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AL139039.2-201ENST00000407436 479 ntBASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 PDSS1P2-201ENST00000449397 678 ntBASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AC110743.1-201ENST00000584870 478 ntBASIC6.24□□□□□ -1.41
SCAPERQ9BY12 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.24□□□□□ -1.41
SCAPERQ9BY12 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 MIR183-201ENST00000384958 110 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 RPS11P1-201ENST00000451072 473 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 PLGLA-201ENST00000465668 449 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 RPL7P1-201ENST00000468161 747 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 RPL7P9-201ENST00000468715 747 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 RPL23AP37-201ENST00000479658 549 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 AC093853.1-201ENST00000515689 483 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 AC006272.2-201ENST00000594725 163 ntBASIC6.23□□□□□ -1.41
SCAPERQ9BY12 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCAPERQ9BY12 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 Z82217.1-201ENST00000625157 8149 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 MIR34B-201ENST00000385076 84 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 SNORD66.1-201ENST00000391230 76 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 MIR1179-201ENST00000408703 91 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AP000907.1-201ENST00000428428 510 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 BTG4P1-201ENST00000510421 183 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC007991.1-201ENST00000522680 631 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 IGKV2D-19-201ENST00000523346 262 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC005412.1-201ENST00000580812 1049 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 BNIP3P11-201ENST00000603878 563 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC097505.1-201ENST00000610199 565 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC007342.8-201ENST00000623278 678 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 AC073346.2-201ENST00000624724 2058 ntBASIC6.22□□□□□ -1.41
SCAPERQ9BY12 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SCAPERQ9BY12 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCAPERQ9BY12 AL133268.1-201ENST00000405676 1401 ntBASIC6.21□□□□□ -1.41
SCAPERQ9BY12 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 RN7SKP167-201ENST00000411047 285 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms