Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 CYCSP2-201ENST00000558168 301 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC137800.2-201ENST00000574375 120 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC068768.2-201ENST00000602352 343 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AL161729.4-201ENST00000604650 476 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC103710.1-201ENST00000610003 901 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC008115.3-201ENST00000614874 549 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC008250.2-201ENST00000615261 205 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC108479.2-201ENST00000617314 601 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC026634.1-201ENST00000634369 198 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LRRC77P-213ENST00000637727 880 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AL354685.2-201ENST00000448218 1447 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL442128.2-201ENST00000620246 1824 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 RNU105B-201ENST00000364478 208 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC104297.1-201ENST00000393779 870 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL450338.1-201ENST00000407987 512 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 MTCO1P17-201ENST00000411522 491 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC009237.5-201ENST00000414271 501 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 FCF1P2-201ENST00000415284 583 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC245054.1-201ENST00000420944 258 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL590399.4-201ENST00000436561 601 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC079922.1-201ENST00000443291 359 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 RPL39P6-201ENST00000448289 150 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 RN7SL352P-201ENST00000466002 277 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC090638.1-201ENST00000498296 909 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC005363.1-201ENST00000530779 351 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 CYCSP38-201ENST00000559840 322 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 MIR5697-201ENST00000578045 78 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 PRELID3BP8-201ENST00000604148 295 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AP001330.5-201ENST00000607176 411 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AL592295.2-201ENST00000612578 206 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 AC231657.1-201ENST00000624313 397 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 MIR6863-201ENST00000636112 90 ntBASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCHD1Q96NR3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms