Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC004022.2-201ENST00000413824 193 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC079809.1-201ENST00000415468 276 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 HMGN2P27-201ENST00000427352 270 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC234064.1-201ENST00000436312 247 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 MTCYBP39-201ENST00000437562 491 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 RPS24P1-201ENST00000438550 371 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 CNOT7P2-201ENST00000441051 832 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 RPS26P30-201ENST00000443431 335 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 ZNF733P-202ENST00000444809 1573 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 RN7SL172P-201ENST00000460535 303 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 SETP11-201ENST00000473027 690 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 RN7SL222P-201ENST00000476452 299 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 GAPDHP36-201ENST00000480688 918 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 RPS7P6-201ENST00000485777 579 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC092045.1-201ENST00000495716 1231 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC110775.1-201ENST00000513721 462 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 CDC42P3-201ENST00000518493 633 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 NDUFA5P2-201ENST00000519723 344 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 UBE2NP1-201ENST00000545592 458 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC126615.2-201ENST00000553003 515 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL359219.2-201ENST00000555184 348 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC044913.1-201ENST00000557200 430 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 MIR4666A-201ENST00000580160 79 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC008759.1-201ENST00000589783 983 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC006363.1-201ENST00000603806 463 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC099676.1-201ENST00000608886 657 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC118658.2-201ENST00000618697 459 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC090582.1-201ENST00000636321 199 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC087821.2-201ENST00000637086 450 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 CASC19-206ENST00000641028 1430 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 AC096656.1-201ENST00000623826 1364 ntBASIC5.27□□□□□ -1.57
RNF31Q96EP0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF31Q96EP0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF31Q96EP0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 AC009962.1-201ENST00000567327 3813 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 CASC19-281ENST00000642118 1554 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF31Q96EP0 MIR133B-201ENST00000362210 119 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 RN7SKP185-201ENST00000362813 326 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 RNU4-7P-201ENST00000364758 141 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 RNU6-452P-201ENST00000384406 107 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 Y_RNA.560-201ENST00000384689 102 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 AP000357.1-201ENST00000409926 1165 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 RNU6-575P-201ENST00000411326 105 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 TCEA1P4-201ENST00000415066 844 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 P2RY10P2-201ENST00000416730 913 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 OR6K4P-201ENST00000423179 955 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL049610.1-201ENST00000423374 372 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 AC012519.1-201ENST00000424588 610 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL590762.4-201ENST00000425885 253 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AC009784.1-201ENST00000426484 460 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 CNOT7P1-201ENST00000429006 852 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AC124944.2-201ENST00000429866 1242 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 HMGB1P45-201ENST00000435986 653 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL353093.1-201ENST00000441292 436 ntBASIC5.26□□□□□ -1.57
RNF31Q96EP0 AL591503.2-201ENST00000442314 1005 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms