Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL022393.1-201ENST00000625142 1677 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 RNA5SP51-201ENST00000364750 119 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 AL161631.1-201ENST00000417933 486 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 OR2AH1P-201ENST00000425717 928 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 SETP6-201ENST00000479329 568 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 MTND1P6-201ENST00000523621 946 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.7□□□□□ -1.34
TOPBP1Q92547 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.7□□□□□ -1.34
TOPBP1Q92547 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC6.7□□□□□ -1.34
TOPBP1Q92547 AC027807.1-201ENST00000559921 996 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 AC025627.2-201ENST00000576220 160 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 AC243654.2-201ENST00000612843 443 ntBASIC6.7□□□□□ -1.34
TOPBP1Q92547 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOPBP1Q92547 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.7□□□□□ -1.34
TOPBP1Q92547 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AL669831.5-218ENST00000591702 1873 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 MIR490-201ENST00000384865 128 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 SETP14-201ENST00000497538 873 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AC063950.1-201ENST00000552036 308 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 MIR5187-201ENST00000583479 76 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 MIR8069-1-201ENST00000616627 86 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 MIR8069-2-201ENST00000621412 86 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.69□□□□□ -1.34
TOPBP1Q92547 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOPBP1Q92547 AC007529.1-201ENST00000418574 2178 ntBASIC6.69□□□□□ -1.34
TOPBP1Q92547 ZNF833P-201ENST00000424938 1494 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RNA5SP97-201ENST00000365006 84 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 CTSL3P-202ENST00000412179 788 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 MTND2P15-201ENST00000418575 892 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC009506.2-201ENST00000420635 840 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RPS4XP10-201ENST00000465034 731 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RNU1-103P-201ENST00000516502 125 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC007458.1-201ENST00000542812 373 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RNU1-30P-201ENST00000606575 163 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC008833.1-201ENST00000611633 691 ntBASIC6.68□□□□□ -1.34
TOPBP1Q92547 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOPBP1Q92547 RNA5SP187-201ENST00000384400 119 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 ATP5A1P2-201ENST00000412323 255 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 RPS7P15-201ENST00000415804 584 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 Z74696.2-201ENST00000436514 498 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 RAD23BP3-201ENST00000454157 1152 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 AC104849.1-201ENST00000462623 405 ntBASIC6.67□□□□□ -1.34
TOPBP1Q92547 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOPBP1Q92547 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOPBP1Q92547 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOPBP1Q92547 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOPBP1Q92547 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.67□□□□□ -1.34
TOPBP1Q92547 BOLA3P4-201ENST00000418151 400 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 BX510359.1-201ENST00000456973 237 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 RN7SKP13-201ENST00000515933 244 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 RN7SKP18-201ENST00000516005 275 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC090286.3-201ENST00000573133 187 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC093591.2-201ENST00000565254 3843 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC097461.1-201ENST00000568928 2821 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms